RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 GSDMAQ96QA5 445 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 LRP6O75581 1613 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 ACTN1P12814 892 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 NR2F2P24468 414 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 LXNQ9BS40 222 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 SPATC1LQ9H0A9 340 aa10.16□□□□□ -0.78
PTPRE-202ENST00000306042 DAPK3O43293 454 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 CD2BP2O95400 341 aaKnown RBP10.15□□□□□ -0.78
PTPRE-202ENST00000306042 SLFN14P0C7P3 912 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 SHMT1P34896 483 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 LACTBP83111 547 aaPredicted RBP10.15□□□□□ -0.78
PTPRE-202ENST00000306042 PKP1Q13835 747 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 DGKDQ16760 1214 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 KIAA0753Q2KHM9 967 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 GBP6Q6ZN66 633 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 THNSL1Q8IYQ7 743 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 PPM1KQ8N3J5 372 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 GMCL1P1Q8NEA9 526 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 GMCL1Q96IK5 515 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 MSTO1Q9BUK6 570 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 MAK16Q9BXY0 300 aaKnown RBP10.15□□□□□ -0.78
PTPRE-202ENST00000306042 C2orf40Q9H1Z8 148 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 PCIF1Q9H4Z3 704 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 COMMD10Q9Y6G5 202 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 MAFGO15525 162 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 PGK2P07205 417 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 CYP2C8P10632 490 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 PTPRAP18433 802 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 LRRC41Q15345 812 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 URGCPQ8TCY9 931 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 SELENOOQ9BVL4 669 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 ASCC2Q9H1I8 757 aaPredicted RBP10.15□□□□□ -0.78
PTPRE-202ENST00000306042 SNX25Q9H3E2 840 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 MYO1EQ12965 1108 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 LAMC2Q13753 1193 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 SKIV2LQ15477 1246 aaKnown RBP10.15□□□□□ -0.78
PTPRE-202ENST00000306042 SURF1Q15526 300 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 CENPHQ9H3R5 247 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 GAKO14976 1311 aa10.15□□□□□ -0.78
PTPRE-202ENST00000306042 AKR1B15C9JRZ8 316 aaPredicted RBP10.15□□□□□ -0.79
PTPRE-202ENST00000306042 CAPN9O14815 690 aa10.15□□□□□ -0.79
PTPRE-202ENST00000306042 STRNO43815 780 aa10.15□□□□□ -0.79
PTPRE-202ENST00000306042 EIF3JO75822 258 aaKnown RBP10.15□□□□□ -0.79
PTPRE-202ENST00000306042 PSMC2P35998 433 aaKnown RBP10.15□□□□□ -0.79
PTPRE-202ENST00000306042 EPHA7Q15375 998 aa10.15□□□□□ -0.79
PTPRE-202ENST00000306042 CCDC186Q7Z3E2 898 aa10.15□□□□□ -0.79
PTPRE-202ENST00000306042 FAM207AQ9NSI2 230 aaPredicted RBP10.15□□□□□ -0.79
PTPRE-202ENST00000306042 LMO7Q8WWI1 1683 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 CLDN3O15551 220 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 CCDC175P0C221 793 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 SKILP12757 684 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 DSG3P32926 999 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 GNG11P61952 73 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 MORC3Q14149 939 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 ZFPM1Q8IX07 1006 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 EPSTI1Q96J88 318 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 ALDH8A1Q9H2A2 487 aaPredicted RBP10.14□□□□□ -0.79
PTPRE-202ENST00000306042 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 FAM198AQ9UFP1 575 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 CTSHP09668 335 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 FANCCQ00597 558 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 DSTYKQ6XUX3 929 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 SOCS4Q8WXH5 440 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 JAKMIP2Q96AA8 810 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 CCDC97Q96F63 343 aaPredicted RBP10.14□□□□□ -0.79
PTPRE-202ENST00000306042 ZNF668Q96K58 619 aaPredicted RBP10.14□□□□□ -0.79
PTPRE-202ENST00000306042 TAAR1Q96RJ0 339 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 P2RX7Q99572 595 aaKnown RBP10.14□□□□□ -0.79
PTPRE-202ENST00000306042 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTPRE-202ENST00000306042 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 PABPN1LA6NDY0 278 aaKnown RBP10.14□□□□□ -0.79
PTPRE-202ENST00000306042 SFI1A8K8P3 1242 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 DCDC2CA8MYV0 355 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 IRF6O14896 467 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 CDC42EP1Q00587 391 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 RESTQ13127 1097 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 MOB2Q70IA6 237 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 FAM186BQ8IYM0 893 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 DPF3Q92784 378 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 NLRC4Q9NPP4 1024 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 RCOR1Q9UKL0 485 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 CLIC2O15247 247 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 STAM2O75886 525 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 ANTXR2P58335 489 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 KLHL30Q0D2K2 578 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 XKR3Q5GH77 459 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 IER5Q5VY09 327 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 PCDHA5Q9Y5H7 936 aa10.14□□□□□ -0.79
PTPRE-202ENST00000306042 POTECB2RU33 542 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 SPOPO43791 374 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 LDHAP00338 332 aaKnown RBP10.13□□□□□ -0.79
PTPRE-202ENST00000306042 DDIT3P35638 169 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 STAT1P42224 750 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 ZNF568Q3ZCX4 644 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 KMT5BQ4FZB7 885 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 PCSK9Q8NBP7 692 aaKnown RBP10.13□□□□□ -0.79
PTPRE-202ENST00000306042 UBXN4Q92575 508 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 AGTPBP1Q9UPW5 1226 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 TCRBV5S4A2TA0A5A2 114 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms