RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 KSR1Q8IVT5 923 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 BANK1Q8NDB2 785 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 NOC3LQ8WTT2 800 aaKnown RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 LRRC27Q9C0I9 530 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 UNC45AQ9H3U1 944 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 GGA3Q9NZ52 723 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 RIPK3Q9Y572 518 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 CTIFO43310 598 aaKnown RBP12.63□□□□□ -0.39
SCG2-201ENST00000305409 CCDC175P0C221 793 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
SCG2-201ENST00000305409 NSMFQ6X4W1 530 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 TAAR1Q96RJ0 339 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 MMRN2Q9H8L6 949 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 TRIM10Q9UDY6 481 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 FER1L6Q2WGJ9 1857 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
SCG2-201ENST00000305409 MYCLP12524 364 aaPredicted RBP12.63□□□□□ -0.39
SCG2-201ENST00000305409 WDR59Q6PJI9 974 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 FAM114A1Q8IWE2 563 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 SYT2Q8N9I0 419 aaPredicted RBP12.63□□□□□ -0.39
SCG2-201ENST00000305409 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 KIAA1683Q9H0B3 1180 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 NDST4Q9H3R1 872 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 KIF13BQ9NQT8 1826 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 RABGAP1Q9Y3P9 1069 aa12.63□□□□□ -0.39
SCG2-201ENST00000305409 CTDP1Q9Y5B0 961 aaPredicted RBP12.63□□□□□ -0.39
SCG2-201ENST00000305409 IPO5O00410 1097 aaKnown RBP12.62□□□□□ -0.39
SCG2-201ENST00000305409 CCP110O43303 1012 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 RPS6P62753 249 aaKnown RBP12.62□□□□□ -0.39
SCG2-201ENST00000305409 PSMD2Q13200 908 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 VWA3BQ502W6 1294 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 MCTP2Q6DN12 878 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 OR8K1Q8NGG5 319 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 TSG101Q99816 390 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 HSD17B14Q9BPX1 270 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 SORBS3O60504 671 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 PLA2G6O60733 806 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 TFRCP02786 760 aaKnown RBP12.62□□□□□ -0.39
SCG2-201ENST00000305409 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 SLC5A5Q92911 643 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 KCNH7Q9NS40 1196 aa12.62□□□□□ -0.39
SCG2-201ENST00000305409 A0A1W2PQC6 194 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 TMEM150BA6NC51 233 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 KIF2AO00139 706 aaPredicted RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 DDNO94850 711 aaPredicted RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 PLEKP08567 350 aaPredicted RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 PTPRAP18433 802 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 HOXD13P35453 343 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 SEMA3FQ13275 785 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 ZCWPW2Q504Y3 356 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 FKBP15Q5T1M5 1219 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 RINT1Q6NUQ1 792 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 SYTL5Q8TDW5 730 aaPredicted RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 CAPN11Q9UMQ6 739 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 CLIC2O15247 247 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 NMT1P30419 496 aaKnown RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 CASQ1P31415 396 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 PPP1R2P41236 205 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 HSD17B4P51659 736 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 MRPS9P82933 396 aaKnown RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 LRRC63Q05C16 580 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 HSP90AA2PQ14568 343 aaPredicted RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 PLS1Q14651 629 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 ELF2Q15723 593 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 ZC2HC1CQ53FD0 456 aaPredicted RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 TMTC1Q8IUR5 882 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 LPAR1Q92633 364 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 TRERF1Q96PN7 1200 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 MXRA8Q9BRK3 442 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 NAA15Q9BXJ9 866 aaKnown RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 TTYH3Q9C0H2 523 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 KCTD10Q9H3F6 313 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 REXO2Q9Y3B8 237 aaKnown RBP12.61□□□□□ -0.39
SCG2-201ENST00000305409 SAMM50Q9Y512 469 aa12.61□□□□□ -0.39
SCG2-201ENST00000305409 GCNT3O95395 438 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 BACE1P56817 501 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 FKBP3Q00688 224 aaKnown RBP12.6□□□□□ -0.39
SCG2-201ENST00000305409 TRAF1Q13077 416 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 ADAM9Q13443 819 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 TRIM14Q14142 442 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 CCDC51Q96ER9 411 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 GPRC5DQ9NZD1 345 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 EPN1Q9Y6I3 576 aaPredicted RBP12.6□□□□□ -0.39
SCG2-201ENST00000305409 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
SCG2-201ENST00000305409 VWA5AO00534 786 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
SCG2-201ENST00000305409 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 MAN2A1Q16706 1144 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 ERCC6LQ2NKX8 1250 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
SCG2-201ENST00000305409 ZNF569Q5MCW4 686 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 SCYL3Q8IZE3 742 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 ZNF280CQ8ND82 737 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms