RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PPFIA3O75145 1194 aa30.14■■■□□ 2.42
CDKN2A-201ENST00000304494 HIC1Q14526 733 aa30.14■■■□□ 2.42
CDKN2A-201ENST00000304494 RAB30Q15771 203 aa30.14■■■□□ 2.42
CDKN2A-201ENST00000304494 LARP6Q9BRS8 491 aaKnown RBP30.14■■■□□ 2.42
CDKN2A-201ENST00000304494 PBX4Q9BYU1 374 aa30.14■■■□□ 2.42
CDKN2A-201ENST00000304494 TTYH1Q9H313 450 aaPredicted RBP30.14■■■□□ 2.42
CDKN2A-201ENST00000304494 RNPEPQ9H4A4 650 aa30.14■■■□□ 2.42
CDKN2A-201ENST00000304494 SLC9A2Q9UBY0 812 aa30.14■■■□□ 2.42
CDKN2A-201ENST00000304494 GSTTP1A0A1W2PQM5 241 aa30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 GRXCR1A8MXD5 290 aa30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 CYP3A4P08684 503 aa30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 STK3Q13188 491 aa30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 TRIM71Q2Q1W2 868 aaKnown RBP30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 AGO4Q9HCK5 861 aaKnown RBP30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 ERAP1Q9NZ08 941 aa30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 VPS54Q9P1Q0 977 aa30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 MSRAQ9UJ68 235 aa30.13■■■□□ 2.41
CDKN2A-201ENST00000304494 ARP10275 920 aa30.12■■■□□ 2.41
CDKN2A-201ENST00000304494 ANKRD1Q15327 319 aa30.12■■■□□ 2.41
CDKN2A-201ENST00000304494 CRYGNQ8WXF5 182 aa30.12■■■□□ 2.41
CDKN2A-201ENST00000304494 GLG1Q92896 1179 aa30.12■■■□□ 2.41
CDKN2A-201ENST00000304494 SMARCAD1Q9H4L7 1026 aa30.12■■■□□ 2.41
CDKN2A-201ENST00000304494 SCN5AQ14524 2016 aa30.12■■■□□ 2.41
CDKN2A-201ENST00000304494 BAIAP3O94812 1187 aa30.11■■■□□ 2.41
CDKN2A-201ENST00000304494 DEXIO95424 95 aa30.11■■■□□ 2.41
CDKN2A-201ENST00000304494 ZNF618Q5T7W0 954 aa30.11■■■□□ 2.41
CDKN2A-201ENST00000304494 WNT8BQ93098 351 aa30.11■■■□□ 2.41
CDKN2A-201ENST00000304494 SETD4Q9NVD3 440 aa30.11■■■□□ 2.41
CDKN2A-201ENST00000304494 NRCAMQ92823 1304 aa30.11■■■□□ 2.41
CDKN2A-201ENST00000304494 TREHO43280 583 aa30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 CDKL5O76039 1030 aa30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 ATP2A2P16615 1042 aaKnown RBP30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 PBX2P40425 430 aa30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 NLRP5P59047 1200 aa30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 IL17RAQ96F46 866 aa30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 CDX2Q99626 313 aaPredicted RBP30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 AZI2Q9H6S1 392 aa30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 EMSYQ7Z589 1322 aa30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 COL6A3P12111 3177 aa30.1■■■□□ 2.41
CDKN2A-201ENST00000304494 FAM86B1E9PN63 330 aa30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 CAND2O75155 1236 aa30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 CXCL10P02778 98 aa30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 FAM86B2P0C5J1 330 aa30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 THPOP40225 353 aa30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 SETQ01105 290 aaPredicted RBP30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 PLA2G4DQ86XP0 818 aa30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 FAM177A1Q8N128 213 aaPredicted RBP30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 LMBR1Q8WVP7 490 aa30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 SLKQ9H2G2 1235 aaPredicted RBP30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 ZNF576Q9H609 170 aa30.09■■■□□ 2.41
CDKN2A-201ENST00000304494 ADAMTS3O15072 1205 aa30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 ACTR2P61160 394 aa30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 ITGB3BPQ13352 177 aaPredicted RBP30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 GPNMBQ14956 572 aa30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 CNKSR3Q6P9H4 555 aa30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 TRAF7Q6Q0C0 670 aa30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 PHOSPHO2Q8TCD6 241 aa30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 SLC9A7Q96T83 725 aa30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 TRIP12Q14669 1992 aaPredicted RBP30.08■■■□□ 2.41
CDKN2A-201ENST00000304494 IGLV3-22A0A075B6J6 115 aa30.07■■■□□ 2.4
CDKN2A-201ENST00000304494 RSPH10B2B2RC85 870 aa30.07■■■□□ 2.4
CDKN2A-201ENST00000304494 NBNO60934 754 aa30.07■■■□□ 2.4
CDKN2A-201ENST00000304494 LGR5O75473 907 aa30.07■■■□□ 2.4
CDKN2A-201ENST00000304494 RSPH10BP0C881 870 aa30.07■■■□□ 2.4
CDKN2A-201ENST00000304494 ADAM17P78536 824 aa30.07■■■□□ 2.4
CDKN2A-201ENST00000304494 RASGRP4Q8TDF6 673 aa30.07■■■□□ 2.4
CDKN2A-201ENST00000304494 TNPO1Q92973 898 aaKnown RBP30.07■■■□□ 2.4
CDKN2A-201ENST00000304494 MARK3P27448 753 aa30.06■■■□□ 2.4
CDKN2A-201ENST00000304494 SCRN1Q12765 414 aa30.06■■■□□ 2.4
CDKN2A-201ENST00000304494 PPFIA1Q13136 1202 aa30.06■■■□□ 2.4
CDKN2A-201ENST00000304494 TPCN1Q9ULQ1 816 aa30.06■■■□□ 2.4
CDKN2A-201ENST00000304494 PCDHA11Q9Y5I1 949 aa30.06■■■□□ 2.4
CDKN2A-201ENST00000304494 CDH23Q9H251 3354 aa30.06■■■□□ 2.4
CDKN2A-201ENST00000304494 IPO5O00410 1097 aaKnown RBP30.05■■■□□ 2.4
CDKN2A-201ENST00000304494 PFKFB2O60825 505 aa30.05■■■□□ 2.4
CDKN2A-201ENST00000304494 KCNJ6P48051 423 aa30.05■■■□□ 2.4
CDKN2A-201ENST00000304494 AK2P54819 239 aa30.05■■■□□ 2.4
CDKN2A-201ENST00000304494 C22orf23Q9BZE7 217 aa30.05■■■□□ 2.4
CDKN2A-201ENST00000304494 SLC28A3Q9HAS3 691 aa30.05■■■□□ 2.4
CDKN2A-201ENST00000304494 PCDHA4Q9UN74 947 aa30.05■■■□□ 2.4
CDKN2A-201ENST00000304494 EFCAB14O75071 495 aa30.04■■■□□ 2.4
CDKN2A-201ENST00000304494 CIITAP33076 1130 aa30.04■■■□□ 2.4
CDKN2A-201ENST00000304494 GALNT17Q6IS24 598 aa30.04■■■□□ 2.4
CDKN2A-201ENST00000304494 PLPPR4Q7Z2D5 763 aa30.04■■■□□ 2.4
CDKN2A-201ENST00000304494 ZNF577Q9BSK1 485 aa30.04■■■□□ 2.4
CDKN2A-201ENST00000304494 TBC1D22BQ9NU19 505 aa30.04■■■□□ 2.4
CDKN2A-201ENST00000304494 ATG7O95352 703 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 SLC26A2P50443 739 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 STAT5BP51692 787 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 RABGGTBP53611 331 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 MBTPS1Q14703 1052 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 GRIK4Q16099 956 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 PRR16Q569H4 304 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 TAF2Q6P1X5 1199 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 MYLIPQ8WY64 445 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 PCYT2Q99447 389 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 NKX2-4Q9H2Z4 354 aa30.03■■■□□ 2.4
CDKN2A-201ENST00000304494 STK36Q9NRP7 1315 aa30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 ABHD14A-ACY1A0A1B0GW23 586 aa30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 RRN3P2A6NIE6 340 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms