RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 MYADML2A6NDP7 307 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 CUTAO60888 179 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 DUSP11O75319 330 aaKnown RBP10.69□□□□□ -0.7
RFX3-201ENST00000302303 SLITRK3O94933 977 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 STBD1O95210 358 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 AKR1A1P14550 325 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 LONP1P36776 959 aaKnown RBP10.69□□□□□ -0.7
RFX3-201ENST00000302303 ACTR2P61160 394 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 NEDD9Q14511 834 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 CCSAPQ6IQ19 270 aaPredicted RBP10.69□□□□□ -0.7
RFX3-201ENST00000302303 ZNF746Q6NUN9 644 aaPredicted RBP10.69□□□□□ -0.7
RFX3-201ENST00000302303 DHX37Q8IY37 1157 aaKnown RBP10.69□□□□□ -0.7
RFX3-201ENST00000302303 TEKT3Q9BXF9 490 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 UNC93B1Q9H1C4 597 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 UPF3AQ9H1J1 476 aaKnown RBP10.69□□□□□ -0.7
RFX3-201ENST00000302303 GOLPH3LQ9H4A5 285 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 JPH1Q9HDC5 661 aaPredicted RBP10.69□□□□□ -0.7
RFX3-201ENST00000302303 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
RFX3-201ENST00000302303 SLC9A2Q9UBY0 812 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 HPSEQ9Y251 543 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 Q9Y3F1 56 aa10.69□□□□□ -0.7
RFX3-201ENST00000302303 A6NJR5 290 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 NKRFO15226 690 aaKnown RBP eCLIP10.68□□□□□ -0.7
RFX3-201ENST00000302303 DYNC1LI2O43237 492 aaPredicted RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 ADAMTS4O75173 837 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 PRPF40AO75400 957 aaKnown RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 MED24O75448 989 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 GH1P01241 217 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 ATP4AP20648 1035 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 ME1P48163 572 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 GJA9P57773 515 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 LAMC2Q13753 1193 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 EPHA7Q15375 998 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 PKN2Q16513 984 aaKnown RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 UGCGQ16739 394 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 HYIQ5T013 277 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 RESP18Q5W5W9 173 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 CATSPER3Q86XQ3 398 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 GIMAP8Q8ND71 665 aaPredicted RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 KLHDC9Q8NEP7 349 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 AFG1LQ8WV93 481 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 SYMPKQ92797 1274 aaKnown RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 ARMC5Q96C12 935 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 ZNF333Q96JL9 665 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 PNMA5Q96PV4 448 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 CCSER1Q9C0I3 900 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 RGL1Q9NZL6 768 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 LRWD1Q9UFC0 647 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 A0A1W2PQ27 194 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 A0A1W2PQ64 194 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 A0A1W2PQD8 194 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 CHMP2AO43633 222 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 ZNF862O60290 1169 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 LGR5O75473 907 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 CMA1P23946 247 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 MCM4P33991 863 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 KRT76Q01546 638 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 GRB10Q13322 594 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 SNW1Q13573 536 aaKnown RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 SLC9C1Q4G0N8 1177 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 NCAPH2Q6IBW4 605 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 KCNK18Q7Z418 384 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 TLK2Q86UE8 772 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 CCDC60Q8IWA6 550 aaPredicted RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 ENGASEQ8NFI3 743 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 PPTC7Q8NI37 304 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 AK8Q96MA6 479 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 SPATA33Q96N06 139 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 EIF2AK1Q9BQI3 630 aaKnown RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 SDF4Q9BRK5 362 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 C16orf70Q9BSU1 422 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 MLXIPQ9HAP2 919 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 HMX1Q9NP08 348 aaPredicted RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 DISC1Q9NRI5 854 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 DDX20Q9UHI6 824 aaKnown RBP10.68□□□□□ -0.7
RFX3-201ENST00000302303 SYNRGQ9UMZ2 1314 aa10.68□□□□□ -0.7
RFX3-201ENST00000302303 A0A087WWV3 80 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 ZBTB39O15060 712 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 PGK1P00558 417 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 MMP3P08254 477 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 SUPT20HL2P0C7V6 817 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 CCL5P13501 91 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 LIG1P18858 919 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 RPA1P27694 616 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 CNGA1P29973 690 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
RFX3-201ENST00000302303 PSMC6P62333 389 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 SP4Q02446 784 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 E2F4Q16254 413 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 NAALADL2Q58DX5 795 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 MIER3Q7Z3K6 550 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 SMAP1Q8IYB5 467 aaPredicted RBP10.67□□□□□ -0.7
RFX3-201ENST00000302303 RDM1Q8NG50 284 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 OR6J1Q8NGC5 347 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 SEPT1Q8WYJ6 367 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 KAT2BQ92831 832 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 DYDC2Q96IM9 177 aa10.67□□□□□ -0.7
RFX3-201ENST00000302303 POLR3CQ9BUI4 534 aaPredicted RBP10.67□□□□□ -0.7
RFX3-201ENST00000302303 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.67□□□□□ -0.7
RFX3-201ENST00000302303 PCDHA10Q9Y5I2 948 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms