RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 SZT2Q5T011 3432 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 H3BRB1 525 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 IPO5O00410 1097 aaKnown RBP20.7■□□□□ 0.9
SPSB3-201ENST00000301717 ACTR2P61160 394 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 NONOQ15233 471 aaKnown RBP eCLIP20.7■□□□□ 0.9
SPSB3-201ENST00000301717 PTGISQ16647 500 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 C9orf50Q5SZB4 431 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 SEPT1Q8WYJ6 367 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 WNT8BQ93098 351 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 ZNF577Q9BSK1 485 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 KATNAL1Q9BW62 490 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 WNT8AQ9H1J5 351 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 TUT1Q9H6E5 874 aaKnown RBP20.7■□□□□ 0.9
SPSB3-201ENST00000301717 GTF2IRD1Q9UHL9 959 aa20.7■□□□□ 0.9
SPSB3-201ENST00000301717 NFASCO94856 1347 aa20.69■□□□□ 0.9
SPSB3-201ENST00000301717 LAMA2P24043 3122 aaKnown RBP20.69■□□□□ 0.9
SPSB3-201ENST00000301717 KRT25Q7Z3Z0 450 aa20.69■□□□□ 0.9
SPSB3-201ENST00000301717 DHX38Q92620 1227 aaKnown RBP20.69■□□□□ 0.9
SPSB3-201ENST00000301717 TNFRSF25Q93038 417 aa20.69■□□□□ 0.9
SPSB3-201ENST00000301717 SCLYQ96I15 445 aa20.69■□□□□ 0.9
SPSB3-201ENST00000301717 RNPEPQ9H4A4 650 aa20.69■□□□□ 0.9
SPSB3-201ENST00000301717 NOD1Q9Y239 953 aa20.69■□□□□ 0.9
SPSB3-201ENST00000301717 CCDC194A0A1B0GVG4 234 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 BTBD18B2RXH4 712 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 MSH4O15457 936 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 MMP1P03956 469 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 SMIM10L2AP0DMW4 78 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 SMIM10L2BP0DMW5 78 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 CSF2RAP15509 400 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 BMP8BP34820 402 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 KRT2P35908 639 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 USP11P51784 963 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 LETM2Q2VYF4 491 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 SESTD1Q86VW0 696 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 DIS3L2Q8IYB7 885 aaKnown RBP20.68■□□□□ 0.9
SPSB3-201ENST00000301717 FAM177A1Q8N128 213 aaPredicted RBP20.68■□□□□ 0.9
SPSB3-201ENST00000301717 LLPHQ9BRT6 129 aaKnown RBP20.68■□□□□ 0.9
SPSB3-201ENST00000301717 SEZ6LQ9BYH1 1024 aa20.68■□□□□ 0.9
SPSB3-201ENST00000301717 SLC37A4O43826 429 aa20.67■□□□□ 0.9
SPSB3-201ENST00000301717 ACRP10323 421 aa20.67■□□□□ 0.9
SPSB3-201ENST00000301717 SETQ01105 290 aaPredicted RBP20.67■□□□□ 0.9
SPSB3-201ENST00000301717 PTPN11Q06124 597 aaPredicted RBP20.67■□□□□ 0.9
SPSB3-201ENST00000301717 MFSD5Q6N075 450 aa20.67■□□□□ 0.9
SPSB3-201ENST00000301717 SETD4Q9NVD3 440 aa20.67■□□□□ 0.9
SPSB3-201ENST00000301717 WNT7AO00755 349 aa20.66■□□□□ 0.9
SPSB3-201ENST00000301717 SUPT20HL2P0C7V6 817 aa20.66■□□□□ 0.9
SPSB3-201ENST00000301717 FPGSQ05932 587 aa20.66■□□□□ 0.9
SPSB3-201ENST00000301717 TRIM29Q14134 588 aa20.66■□□□□ 0.9
SPSB3-201ENST00000301717 SHHQ15465 462 aa20.66■□□□□ 0.9
SPSB3-201ENST00000301717 GLG1Q92896 1179 aa20.66■□□□□ 0.9
SPSB3-201ENST00000301717 ZBTB10Q96DT7 871 aa20.66■□□□□ 0.9
SPSB3-201ENST00000301717 C16orf59Q7L2K0 433 aa20.65■□□□□ 0.9
SPSB3-201ENST00000301717 TDHQ8IZJ6 230 aa20.65■□□□□ 0.9
SPSB3-201ENST00000301717 FAM184AQ8NB25 1140 aa20.65■□□□□ 0.9
SPSB3-201ENST00000301717 C8orf76Q96K31 380 aa20.65■□□□□ 0.9
SPSB3-201ENST00000301717 ZNF215Q9UL58 517 aaPredicted RBP20.65■□□□□ 0.9
SPSB3-201ENST00000301717 CYP3A7-CYP3A51PA0A087WV96 503 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 C17orf102A2RUQ5 167 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 SOX1O00570 391 aaPredicted RBP20.64■□□□□ 0.89
SPSB3-201ENST00000301717 TREHO43280 583 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 CHMP2AO43633 222 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 LGR5O75473 907 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 CYP3A7P24462 503 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 Q4G0T1 1027 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 ABHD15Q6UXT9 468 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 NEK8Q86SG6 692 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 CCDC60Q8IWA6 550 aaPredicted RBP20.64■□□□□ 0.89
SPSB3-201ENST00000301717 VWCEQ96DN2 955 aa20.64■□□□□ 0.89
SPSB3-201ENST00000301717 DDX25Q9UHL0 483 aaKnown RBP20.64■□□□□ 0.89
SPSB3-201ENST00000301717 CCNT1O60563 726 aaKnown RBP20.63■□□□□ 0.89
SPSB3-201ENST00000301717 ETNPPLQ8TBG4 499 aa20.63■□□□□ 0.89
SPSB3-201ENST00000301717 LMBR1Q8WVP7 490 aa20.63■□□□□ 0.89
SPSB3-201ENST00000301717 SLC5A5Q92911 643 aa20.63■□□□□ 0.89
SPSB3-201ENST00000301717 MBOAT7Q96N66 472 aa20.63■□□□□ 0.89
SPSB3-201ENST00000301717 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.63■□□□□ 0.892e-25■■□□□ 13
SPSB3-201ENST00000301717 BRMS1Q9HCU9 246 aa20.63■□□□□ 0.89
SPSB3-201ENST00000301717 EMSYQ7Z589 1322 aa20.63■□□□□ 0.89
SPSB3-201ENST00000301717 BACH1O14867 736 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 ATG7O95352 703 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 HOXC8P31273 242 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 IGBP1P78318 339 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 HMGN5P82970 282 aaKnown RBP20.62■□□□□ 0.89
SPSB3-201ENST00000301717 TRIM71Q2Q1W2 868 aaKnown RBP20.62■□□□□ 0.89
SPSB3-201ENST00000301717 TRMT1LQ7Z2T5 733 aaKnown RBP20.62■□□□□ 0.89
SPSB3-201ENST00000301717 POTEDQ86YR6 584 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 TMEM199Q8N511 208 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 ATP6V0A1Q93050 837 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 UNC45AQ9H3U1 944 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 SMARCAD1Q9H4L7 1026 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 TBC1D22BQ9NU19 505 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 ERAP1Q9NZ08 941 aa20.62■□□□□ 0.89
SPSB3-201ENST00000301717 KIF28PB7ZC32 967 aa20.61■□□□□ 0.89
SPSB3-201ENST00000301717 FXR1P51114 621 aaKnown RBP eCLIP20.61■□□□□ 0.89
SPSB3-201ENST00000301717 STAT5BP51692 787 aa20.61■□□□□ 0.89
SPSB3-201ENST00000301717 LRCH2Q5VUJ6 765 aa20.61■□□□□ 0.89
SPSB3-201ENST00000301717 SWSAP1Q6NVH7 229 aa20.61■□□□□ 0.89
SPSB3-201ENST00000301717 DEFB128Q7Z7B8 93 aa20.61■□□□□ 0.89
SPSB3-201ENST00000301717 TRAPPC12Q8WVT3 735 aa20.61■□□□□ 0.89
SPSB3-201ENST00000301717 LRCH3Q96II8 777 aa20.61■□□□□ 0.89
SPSB3-201ENST00000301717 AZI2Q9H6S1 392 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms