RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 FNTAP49354 379 aa12.9□□□□□ -0.34
ERCC1-202ENST00000300853 MRPL12P52815 198 aaKnown RBP12.9□□□□□ -0.34
ERCC1-202ENST00000300853 CETN1Q12798 172 aa12.9□□□□□ -0.34
ERCC1-202ENST00000300853 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
ERCC1-202ENST00000300853 ZNF365Q70YC5 407 aa12.9□□□□□ -0.34
ERCC1-202ENST00000300853 ENAHQ8N8S7 591 aaPredicted RBP12.9□□□□□ -0.34
ERCC1-202ENST00000300853 LARP4BQ92615 738 aaKnown RBP12.9□□□□□ -0.34
ERCC1-202ENST00000300853 RUNDC3BQ96NL0 473 aa12.9□□□□□ -0.34
ERCC1-202ENST00000300853 ZNF287Q9HBT7 754 aa12.9□□□□□ -0.34
ERCC1-202ENST00000300853 PCDHA4Q9UN74 947 aa12.9□□□□□ -0.34
ERCC1-202ENST00000300853 DNM1LO00429 736 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 RASSF9O75901 435 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 TFAP4Q01664 338 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 ZC3H18Q86VM9 953 aaKnown RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 ERGIC2Q96RQ1 377 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 NUDCD1Q96RS6 583 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 LBHD1Q9BQE6 289 aaPredicted RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 FGFR1OP2Q9NVK5 253 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 CEP72Q9P209 647 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 USP15Q9Y4E8 981 aaPredicted RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 THAP12O43422 761 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 ORC4O43929 436 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 UBOX5O94941 541 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 GNA14O95837 355 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 GNAT1P11488 350 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 ZNF76P36508 570 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 HSPA9P38646 679 aaKnown RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 ZNF844Q08AG5 666 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 MEA1Q16626 185 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 QPCTQ16769 361 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 EXOC3L4Q17RC7 722 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 EARS2Q5JPH6 523 aaKnown RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 GIMAP8Q8ND71 665 aaPredicted RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 ZCRB1Q8TBF4 217 aaKnown RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 PARD3BQ8TEW8 1205 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 OSBPL7Q9BZF2 842 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 GGA2Q9UJY4 613 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 SSU72P8A0A1W2PR75 194 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 SMCO2A6NFE2 343 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 RHOBTB3O94955 611 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 XRCC5P13010 732 aaKnown RBP12.89□□□□□ -0.35
ERCC1-202ENST00000300853 MSH2P43246 934 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 CTSWP56202 376 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 TRAF1Q13077 416 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 ARHGAP44Q17R89 818 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 KLHDC7AQ5VTJ3 777 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 TTLL11Q8NHH1 800 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 AGAP11Q8TF27 550 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 TEKT4Q8WW24 435 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 ZFATQ9P243 1243 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
ERCC1-202ENST00000300853 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
ERCC1-202ENST00000300853 RPL13P26373 211 aaKnown RBP12.88□□□□□ -0.35
ERCC1-202ENST00000300853 ALX1Q15699 326 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 TTI2Q6NXR4 508 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 SEPT14Q6ZU15 432 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 APTXQ7Z2E3 356 aaKnown RBP12.88□□□□□ -0.35
ERCC1-202ENST00000300853 NEK8Q86SG6 692 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 SMC6Q96SB8 1091 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 PFDN1O60925 122 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 GHRP10912 638 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 LRRC63Q05C16 580 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
ERCC1-202ENST00000300853 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 CCDC152Q4G0S7 254 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 THEMIS2Q5TEJ8 643 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 SYCP3Q8IZU3 236 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
ERCC1-202ENST00000300853 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 AK8Q96MA6 479 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 TRIM9Q9C026 710 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 VCX3BQ9H321 246 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 VCX3AQ9NNX9 186 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 PAPOLBQ9NRJ5 636 aaKnown RBP12.88□□□□□ -0.35
ERCC1-202ENST00000300853 PANK4Q9NVE7 773 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 A0A1W2PQJ5 194 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 CAND2O75155 1236 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 ERVK-9P63128 1117 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 KLC1Q07866 573 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 RASGRF1Q13972 1273 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 TRADDQ15628 312 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 PDXDC2PQ6P474 469 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 REXO1Q8N1G1 1221 aaKnown RBP12.88□□□□□ -0.35
ERCC1-202ENST00000300853 TATDN2Q93075 761 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 PITPNM3Q9BZ71 974 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 SLITRK6Q9H5Y7 841 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 GDF3Q9NR23 364 aa12.88□□□□□ -0.35
ERCC1-202ENST00000300853 BZW2Q9Y6E2 419 aaKnown RBP12.88□□□□□ -0.35
ERCC1-202ENST00000300853 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
ERCC1-202ENST00000300853 PDE8AO60658 829 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms