RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 UHMK1Q8TAS1 419 aaKnown RBP14.25□□□□□ -0.13
TVP23A-201ENST00000299866 MICAL1Q8TDZ2 1067 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.25□□□□□ -0.13
TVP23A-201ENST00000299866 P3H4Q92791 437 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 MAGEF1Q9HAY2 307 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 TBC1D7Q9P0N9 293 aa14.25□□□□□ -0.13
TVP23A-201ENST00000299866 PGRMC1O00264 195 aaKnown RBP14.24□□□□□ -0.13
TVP23A-201ENST00000299866 SEMA3FQ13275 785 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 ASIC2Q16515 512 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 LRRC55Q6ZSA7 311 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 ADAT2Q7Z6V5 191 aaKnown RBP14.24□□□□□ -0.13
TVP23A-201ENST00000299866 AGAP11Q8TF27 550 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 LMBR1Q8WVP7 490 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 TSG101Q99816 390 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 TRIM51Q9BSJ1 452 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 FAM129AQ9BZQ8 928 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 DIAPH2O60879 1101 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 CALRP27797 417 aaKnown RBP14.24□□□□□ -0.13
TVP23A-201ENST00000299866 SLC8A3P57103 927 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 SARNPP82979 210 aaKnown RBP14.24□□□□□ -0.13
TVP23A-201ENST00000299866 TMED8Q6PL24 325 aaPredicted RBP14.24□□□□□ -0.13
TVP23A-201ENST00000299866 CDK5RAP3Q96JB5 506 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 MMTAG2Q9BU76 263 aaKnown RBP14.24□□□□□ -0.13
TVP23A-201ENST00000299866 C15orf41Q9Y2V0 281 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 KCPQ6ZWJ8 1503 aa14.24□□□□□ -0.13
TVP23A-201ENST00000299866 SHBGP04278 402 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 IRX1P78414 480 aaPredicted RBP14.23□□□□□ -0.13
TVP23A-201ENST00000299866 ZKSCAN8Q15776 578 aaPredicted RBP14.23□□□□□ -0.13
TVP23A-201ENST00000299866 ARMC2Q8NEN0 867 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 CD2APQ9Y5K6 639 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 A0A0G2JS52 829 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 EME2A4GXA9 379 aaPredicted RBP14.23□□□□□ -0.13
TVP23A-201ENST00000299866 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 USP11P51784 963 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 KCNJ2P63252 427 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 BZW1Q7L1Q6 419 aaKnown RBP14.23□□□□□ -0.13
TVP23A-201ENST00000299866 PRCCQ92733 491 aaPredicted RBP14.23□□□□□ -0.13
TVP23A-201ENST00000299866 PBKQ96KB5 322 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 AK8Q96MA6 479 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 MTFR1LQ9H019 292 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 CCDC113Q9H0I3 377 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 SAMD15Q9P1V8 674 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 TRPC6Q9Y210 931 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 ENO4A6NNW6 628 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 UNC13DQ70J99 1090 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 NELFCDQ8IXH7 590 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 GUF1Q8N442 669 aaKnown RBP14.23□□□□□ -0.13
TVP23A-201ENST00000299866 MAB21L3Q8N8X9 362 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 PNMA1Q8ND90 353 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 SPAG5Q96R06 1193 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.23□□□□□ -0.13
TVP23A-201ENST00000299866 CNOT10Q9H9A5 744 aaKnown RBP14.23□□□□□ -0.13
TVP23A-201ENST00000299866 EBF2Q9HAK2 575 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 ABCF3Q9NUQ8 709 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 AGAP1Q9UPQ3 857 aa14.23□□□□□ -0.13
TVP23A-201ENST00000299866 M0R2N6 131 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 PRPHP41219 470 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 EPS15P42566 896 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 PRPF4BQ13523 1007 aaKnown RBP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 RCSD1Q6JBY9 416 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 BRIP1Q9BX63 1249 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 EDEM3Q9BZQ6 932 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 UTP11Q9Y3A2 253 aaKnown RBP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 COL4A3BPQ9Y5P4 624 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 LAD1O00515 517 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 HGSO14964 777 aaPredicted RBP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 LRRC63Q05C16 580 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 PEX26Q7Z412 305 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 DAAM2Q86T65 1068 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 TAX1BP1Q86VP1 789 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 CCDC26Q8TAB7 109 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 PRMT1Q99873 361 aaKnown RBP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 NUCKS1Q9H1E3 243 aaKnown RBP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 STK38LQ9Y2H1 464 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 ACTN1P12814 892 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 COPB2P35606 906 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 IGHMBP2P38935 993 aaKnown RBP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 TFAP4Q01664 338 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 PTK2Q05397 1052 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 GRB10Q13322 594 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 TRPM8Q7Z2W7 1104 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 EIF1ADQ8N9N8 165 aaKnown RBP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 ACTRT1Q8TDG2 376 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 ZNF317Q96PQ6 595 aaPredicted RBP14.22□□□□□ -0.13
TVP23A-201ENST00000299866 SH3GLB2Q9NR46 395 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 BLOC1S4Q9NUP1 217 aa14.22□□□□□ -0.13
TVP23A-201ENST00000299866 NAPAP54920 295 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 IFI35P80217 286 aaPredicted RBP14.21□□□□□ -0.13
TVP23A-201ENST00000299866 CHRNDQ07001 517 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 GRIK3Q13003 919 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 KIF2BQ8N4N8 673 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 ZNF483Q8TF39 744 aaPredicted RBP14.21□□□□□ -0.13
TVP23A-201ENST00000299866 LARP4BQ92615 738 aaKnown RBP14.21□□□□□ -0.13
TVP23A-201ENST00000299866 FMO2Q99518 471 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 AZI2Q9H6S1 392 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 SLC12A4Q9UP95 1085 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.21□□□□□ -0.13
TVP23A-201ENST00000299866 SLC35G1Q2M3R5 365 aa14.21□□□□□ -0.13
TVP23A-201ENST00000299866 SPICE1Q8N0Z3 855 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms