RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 FASTKD5Q7L8L6 764 aaKnown RBP11.16□□□□□ -0.62
GABRB3-201ENST00000299267 RAD54LQ92698 747 aa11.16□□□□□ -0.62
GABRB3-201ENST00000299267 SALL1Q9NSC2 1324 aa11.16□□□□□ -0.62
GABRB3-201ENST00000299267 CYTH3O43739 400 aa11.16□□□□□ -0.62
GABRB3-201ENST00000299267 GNA14O95837 355 aa11.16□□□□□ -0.62
GABRB3-201ENST00000299267 TOB1P50616 345 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-201ENST00000299267 CYP27A1Q02318 531 aa11.16□□□□□ -0.62
GABRB3-201ENST00000299267 IFRD2Q12894 506 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-201ENST00000299267 TAF12Q16514 161 aa11.16□□□□□ -0.62
GABRB3-201ENST00000299267 CYP2W1Q8TAV3 490 aa11.16□□□□□ -0.62
GABRB3-201ENST00000299267 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
GABRB3-201ENST00000299267 TRIM31Q9BZY9 425 aa11.16□□□□□ -0.62
GABRB3-201ENST00000299267 C19orf81C9J6K1 198 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 TNPO2O14787 897 aaKnown RBP11.15□□□□□ -0.62
GABRB3-201ENST00000299267 EIF3JO75822 258 aaKnown RBP11.15□□□□□ -0.62
GABRB3-201ENST00000299267 TXNP10599 105 aaKnown RBP11.15□□□□□ -0.62
GABRB3-201ENST00000299267 VWA3BQ502W6 1294 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 SPOUT1Q5T280 376 aaKnown RBP11.15□□□□□ -0.62
GABRB3-201ENST00000299267 DCUN1D2Q6PH85 259 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 SPATA33Q96N06 139 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 SELENOOQ9BVL4 669 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 TBC1D22BQ9NU19 505 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 PARP2Q9UGN5 583 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 IKBKBO14920 756 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 NMT1P30419 496 aaKnown RBP11.15□□□□□ -0.62
GABRB3-201ENST00000299267 BACE1P56817 501 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 SETQ01105 290 aaPredicted RBP11.15□□□□□ -0.62
GABRB3-201ENST00000299267 COASYQ13057 564 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 PPP1R18Q6NYC8 613 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 GSTA5Q7RTV2 222 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 GGPS1O95749 300 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 MYL3P08590 195 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 VCAM1P19320 739 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 ACTN2P35609 894 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 NPEPPSP55786 919 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 UNC13DQ70J99 1090 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 ADAT2Q7Z6V5 191 aaKnown RBP11.15□□□□□ -0.62
GABRB3-201ENST00000299267 LMBR1Q8WVP7 490 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 ACCSQ96QU6 501 aa11.15□□□□□ -0.62
GABRB3-201ENST00000299267 YDJCA8MPS7 323 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 RGL2O15211 777 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 TEX33O43247 280 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 P4HBP07237 508 aaKnown RBP11.15□□□□□ -0.63
GABRB3-201ENST00000299267 PSMC2P35998 433 aaKnown RBP11.15□□□□□ -0.63
GABRB3-201ENST00000299267 SNAPC2Q13487 334 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 PLA2G4FQ68DD2 849 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 DLK2Q6UY11 383 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 RETREG2Q8NC44 543 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 SECISBP2LQ93073 1101 aaKnown RBP11.15□□□□□ -0.63
GABRB3-201ENST00000299267 PSMD1Q99460 953 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 METTL14Q9HCE5 456 aaKnown RBP11.15□□□□□ -0.63
GABRB3-201ENST00000299267 C1orf112Q9NSG2 853 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 RWDD2AQ9UIY3 292 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 SLIT2O94813 1529 aa11.15□□□□□ -0.63
GABRB3-201ENST00000299267 GOLGA6L10A0A0M3HER8 536 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 VIL1P09327 827 aaKnown RBP11.14□□□□□ -0.63
GABRB3-201ENST00000299267 GAP43P17677 238 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 PRIMPOLQ96LW4 560 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 TMX2Q9Y320 296 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 RIOK3O14730 519 aaKnown RBP11.14□□□□□ -0.63
GABRB3-201ENST00000299267 CEP104O60308 925 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 MAATS1Q7Z4T9 603 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 APBB1IPQ7Z5R6 666 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-201ENST00000299267 HOOK3Q86VS8 718 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 CCDC25Q86WR0 208 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 RHPN2Q8IUC4 686 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 KSR1Q8IVT5 923 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 PLVAPQ9BX97 442 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 NDST4Q9H3R1 872 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 EPN1Q9Y6I3 576 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-201ENST00000299267 DYNC1LI2O43237 492 aaPredicted RBP11.14□□□□□ -0.63
GABRB3-201ENST00000299267 CD58P19256 250 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 KRT76Q01546 638 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 STK4Q13043 487 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 PPP2R5AQ15172 486 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 ZNF394Q53GI3 561 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 GOLGA5Q8TBA6 731 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 SAAL1Q96ER3 474 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 AGXT2Q9BYV1 514 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 TRIM9Q9C026 710 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 PCDHA10Q9Y5I2 948 aa11.14□□□□□ -0.63
GABRB3-201ENST00000299267 DENND3A2RUS2 1198 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 MYL7Q01449 175 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 MAN2A1Q16706 1144 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 PNMA8AQ86V59 439 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-201ENST00000299267 ZNF302Q9NR11 478 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 KCNH7Q9NS40 1196 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 ASTN2O75129 1339 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-201ENST00000299267 ENC1O14682 589 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 SCARA5Q6ZMJ2 495 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 TMEM143Q96AN5 459 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 GDAP1L1Q96MZ0 367 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 IDI2Q9BXS1 227 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 SPTLC3Q9NUV7 552 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 GCNT4Q9P109 453 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 PPP2R2CQ9Y2T4 447 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 SOWAHDA6NJG2 315 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 ONECUT3O60422 494 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms