RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
TRUB1-201ENST00000298746 ARMC9Q7Z3E5 817 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 STAMBPL1Q96FJ0 436 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 NSRP1Q9H0G5 558 aaKnown RBP12.46□□□□□ -0.41
TRUB1-201ENST00000298746 KCNK9Q9NPC2 374 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 CNOT8Q9UFF9 292 aaKnown RBP12.46□□□□□ -0.41
TRUB1-201ENST00000298746 SLIT3O75094 1523 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 GOLGA6L10A0A0M3HER8 536 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 TMEM110-MUSTN1A8MSY1 372 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 FGGP02679 453 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 COPB2P35606 906 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 ADAM9Q13443 819 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 MEI1Q5TIA1 1274 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 BAP1Q92560 729 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 RIOK1Q9BRS2 568 aaKnown RBP12.46□□□□□ -0.41
TRUB1-201ENST00000298746 ANAPC4Q9UJX5 808 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 PJA2O43164 708 aa12.46□□□□□ -0.42
TRUB1-201ENST00000298746 ACTN1P12814 892 aa12.46□□□□□ -0.42
TRUB1-201ENST00000298746 SARNPP82979 210 aaKnown RBP12.46□□□□□ -0.42
TRUB1-201ENST00000298746 LRIG3Q6UXM1 1119 aa12.46□□□□□ -0.42
TRUB1-201ENST00000298746 CD302Q8IX05 232 aa12.46□□□□□ -0.42
TRUB1-201ENST00000298746 GUF1Q8N442 669 aaKnown RBP12.46□□□□□ -0.42
TRUB1-201ENST00000298746 SLC44A5Q8NCS7 719 aa12.46□□□□□ -0.42
TRUB1-201ENST00000298746 LRRC15Q8TF66 581 aa12.46□□□□□ -0.42
TRUB1-201ENST00000298746 PANK4Q9NVE7 773 aa12.46□□□□□ -0.42
TRUB1-201ENST00000298746 CETN3O15182 167 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 FLOT1O75955 427 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 CHN1P15882 459 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 HNRNPH3P31942 346 aaKnown RBP12.45□□□□□ -0.42
TRUB1-201ENST00000298746 MMP14P50281 582 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 LLGL1Q15334 1064 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 ACCSLQ4AC99 568 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 USP17L2Q6R6M4 530 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 MREGQ8N565 214 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 PBKQ96KB5 322 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 XPO6Q96QU8 1125 aaKnown RBP12.45□□□□□ -0.42
TRUB1-201ENST00000298746 TMEM260Q9NX78 707 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 ATXN2Q99700 1313 aaKnown RBP12.45□□□□□ -0.42
TRUB1-201ENST00000298746 H2AFZP0C0S5 128 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 PRDX5P30044 214 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 MECOMQ03112 1051 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 NBPF9Q3BBW0 867 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 CCDC38Q502W7 563 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 TRIM68Q6AZZ1 485 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 H2AFVQ71UI9 128 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 ANKRD42Q8N9B4 389 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 INPP4AQ96PE3 977 aaPredicted RBP12.45□□□□□ -0.42
TRUB1-201ENST00000298746 MLXIPLQ9NP71 852 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 SNX24Q9Y343 169 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 NID2Q14112 1375 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 TNS3Q68CZ2 1445 aa12.45□□□□□ -0.42
TRUB1-201ENST00000298746 MYO5AQ9Y4I1 1855 aaKnown RBP12.45□□□□□ -0.42
TRUB1-201ENST00000298746 CCT8L1PA6NM43 557 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 CAND2O75155 1236 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 ZKSCAN8Q15776 578 aaPredicted RBP12.44□□□□□ -0.42
TRUB1-201ENST00000298746 ZNF572Q7Z3I7 529 aaPredicted RBP12.44□□□□□ -0.42
TRUB1-201ENST00000298746 CUL5Q93034 780 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 GJA10Q969M2 543 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRUB1-201ENST00000298746 LRRC27Q9C0I9 530 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
TRUB1-201ENST00000298746 LRRC14Q15048 493 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 OTUD6AQ7L8S5 288 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 KLHL29Q96CT2 875 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 FAM167BQ9BTA0 163 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 NEUROG2Q9H2A3 272 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 BARHL2Q9NY43 387 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 AMFRQ9UKV5 643 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 DIAPH2O60879 1101 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 ATP6V1G2O95670 118 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 PTK2Q05397 1052 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 ADCY1Q08828 1119 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 ZNF211Q13398 564 aaPredicted RBP12.44□□□□□ -0.42
TRUB1-201ENST00000298746 CRYMQ14894 314 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 PAIP2Q9BPZ3 127 aaKnown RBP12.44□□□□□ -0.42
TRUB1-201ENST00000298746 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
TRUB1-201ENST00000298746 RIC8AQ9NPQ8 531 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 SH3GLB2Q9NR46 395 aa12.44□□□□□ -0.42
TRUB1-201ENST00000298746 ARPP21Q9UBL0 812 aaPredicted RBP12.44□□□□□ -0.42
TRUB1-201ENST00000298746 TLR2O60603 784 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 KCNMA1Q12791 1236 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 UAP1Q16222 522 aaPredicted RBP12.43□□□□□ -0.42
TRUB1-201ENST00000298746 HGSNATQ68CP4 663 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 CCDC65Q8IXS2 484 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 KIF2BQ8N4N8 673 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
TRUB1-201ENST00000298746 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 RAB17Q9H0T7 212 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 AZI2Q9H6S1 392 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 FAM114A2Q9NRY5 505 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 DAAM1Q9Y4D1 1078 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 CCDC169A6NNP5 214 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
TRUB1-201ENST00000298746 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
TRUB1-201ENST00000298746 NR2F2P24468 414 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 EIF6P56537 245 aaKnown RBP12.43□□□□□ -0.42
TRUB1-201ENST00000298746 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 TATDN2Q93075 761 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms