RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CCZ1P86791 482 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 PABPC4Q13310 644 aaKnown RBP eCLIP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 BAATQ14032 418 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 KRT31Q15323 416 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 SPECC1LQ69YQ0 1117 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 SYT2Q8N9I0 419 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-202ENST00000297979 HSD17B14Q9BPX1 270 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 UNC45AQ9H3U1 944 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 JADE2Q9NQC1 790 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 KCNH7Q9NS40 1196 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 RGL1Q9NZL6 768 aa15.87■□□□□ 0.13
C9orf3-202ENST00000297979 PPATQ06203 517 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 PTPN21Q16825 1174 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 GUF1Q8N442 669 aaKnown RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 PDCD2LQ9BRP1 358 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 SPTLC3Q9NUV7 552 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 IQCA1LA6NCM1 817 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 LRRC10BA6NIK2 292 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 KRT18P05783 430 aaKnown RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 SKILP12757 684 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 TREML2Q5T2D2 321 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 ARHGEF16Q5VV41 709 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 B3GNT9Q6UX72 402 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 ERO1BQ86YB8 467 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 CSGALNACT2Q8N6G5 542 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 DUSP9Q99956 384 aaKnown RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 SRRTQ9BXP5 876 aaKnown RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 ACAD9Q9H845 621 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 GRIN3BO60391 1043 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 EYA4O95677 639 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 MUTP22033 750 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 MTMR1Q13613 665 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 CTTNQ14247 550 aaKnown RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 EAPPQ56P03 285 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 ARSHQ5FYA8 562 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 FAM26FQ5R3K3 315 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 ANKRD40Q6AI12 368 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 IRF2BP1Q8IU81 584 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 OTUD5Q96G74 571 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 DYDC2Q96IM9 177 aa15.86■□□□□ 0.13
C9orf3-202ENST00000297979 ZHX1Q9UKY1 873 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-202ENST00000297979 NPHP3-ACAD11A0A0J9YXS1 232 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 TEX33O43247 280 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 SLITRK3O94933 977 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 EEF1GP26641 437 aaKnown RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 TBX2Q13207 712 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 PLS1Q14651 629 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 EPHA7Q15375 998 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 CENPPQ6IPU0 288 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 CLMNQ96JQ2 1002 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 AGO4Q9HCK5 861 aaKnown RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 A0A0G2JLL6 359 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 FRMD3A2A2Y4 597 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 IRF6O14896 467 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 MYCLP12524 364 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 COPB1P53618 953 aaKnown RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 XRRA1Q6P2D8 792 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 MOB2Q70IA6 237 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 PRRT2Q7Z6L0 340 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 TPH2Q8IWU9 490 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 PROCA1Q8NCQ7 364 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 MAF1Q9H063 256 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 BHMT2Q9H2M3 363 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 TAB2Q9NYJ8 693 aa15.85■□□□□ 0.13
C9orf3-202ENST00000297979 MAGEC2Q9UBF1 373 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-202ENST00000297979 SPDYE5A6NIY4 337 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 N4BP3O15049 544 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 NRDCO43847 1150 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 GADL1Q6ZQY3 521 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 ILDR2Q71H61 639 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 CREBRFQ8IUR6 639 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 NEK9Q8TD19 979 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 PURBQ96QR8 312 aaKnown RBP15.84■□□□□ 0.13
C9orf3-202ENST00000297979 PKD2L1Q9P0L9 805 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 PBX1P40424 430 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-202ENST00000297979 RAD51AP2Q09MP3 1159 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 FAM114A1Q8IWE2 563 aa15.84■□□□□ 0.13
C9orf3-202ENST00000297979 DDX39AO00148 427 aaKnown RBP15.83■□□□□ 0.13
C9orf3-202ENST00000297979 CXCL11O14625 94 aa15.83■□□□□ 0.13
C9orf3-202ENST00000297979 OFD1O75665 1012 aa15.83■□□□□ 0.13
C9orf3-202ENST00000297979 CCND2P30279 289 aa15.83■□□□□ 0.13
C9orf3-202ENST00000297979 GIT2Q14161 759 aa15.83■□□□□ 0.13
C9orf3-202ENST00000297979 HERC4Q5GLZ8 1057 aaPredicted RBP15.83■□□□□ 0.13
C9orf3-202ENST00000297979 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.83■□□□□ 0.13
C9orf3-202ENST00000297979 MYOCDQ8IZQ8 938 aa15.83■□□□□ 0.13
C9orf3-202ENST00000297979 VPS16Q9H269 839 aa15.83■□□□□ 0.13
C9orf3-202ENST00000297979 PDCL3Q9H2J4 239 aa15.83■□□□□ 0.13
C9orf3-202ENST00000297979 A1CFQ9NQ94 594 aaKnown RBP15.83■□□□□ 0.13
C9orf3-202ENST00000297979 CYP39A1Q9NYL5 469 aa15.83■□□□□ 0.13
C9orf3-202ENST00000297979 DHX15O43143 795 aaKnown RBP15.83■□□□□ 0.12
C9orf3-202ENST00000297979 LRRC63Q05C16 580 aa15.83■□□□□ 0.12
C9orf3-202ENST00000297979 ITGB3BPQ13352 177 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-202ENST00000297979 LBX2Q6XYB7 198 aa15.83■□□□□ 0.12
C9orf3-202ENST00000297979 MIER3Q7Z3K6 550 aa15.83■□□□□ 0.12
C9orf3-202ENST00000297979 PNMA8AQ86V59 439 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms