RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 MTM1Q13496 603 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 RWDD4Q6NW29 188 aaKnown RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 NFRKBQ6P4R8 1299 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 QTRT2Q9H974 415 aaKnown RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 RAVER2Q9HCJ3 691 aaKnown RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 HOXB7P09629 217 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 MTF1Q14872 753 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 SYDE2Q5VT97 1194 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 TRMT10CQ7L0Y3 403 aaKnown RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 CYFIP1Q7L576 1253 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 PIGBQ92521 554 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 MRFAP1L1Q96HT8 127 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 ANKRD36BP1Q96IX9 119 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 FAM49AQ9H0Q0 323 aaPredicted RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 TBX22Q9Y458 520 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 E9PMD0 336 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 SLC27A3Q5K4L6 730 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 LMBRD2Q68DH5 695 aaPredicted RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 XAB2Q9HCS7 855 aaKnown RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 FAM8A1Q9UBU6 413 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 FAM135BQ49AJ0 1406 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 CPP00450 1065 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 STAT2P52630 851 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 PPWD1Q96BP3 646 aaKnown RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 CCDC51Q96ER9 411 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 MXD3Q9BW11 206 aa16.72■□□□□ 0.27
FNDC1-201ENST00000297267 FOXP1Q9H334 677 aaPredicted RBP16.72■□□□□ 0.27
FNDC1-201ENST00000297267 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
FNDC1-201ENST00000297267 PTK2Q05397 1052 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 P3H4Q92791 437 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 MYBP10242 640 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 FAM83BQ5T0W9 1011 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 NT5C1BQ96P26 610 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 ELAC2Q9BQ52 826 aaKnown RBP16.71■□□□□ 0.27
FNDC1-201ENST00000297267 ADAMTS1Q9UHI8 967 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 DAAM1Q9Y4D1 1078 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 DISP1Q96F81 1524 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 MYO1FO00160 1098 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 C21orf2O43822 256 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 CDC25BP30305 580 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 PDCLQ13371 301 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 CEP128Q6ZU80 1094 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 FAM118BQ9BPY3 351 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 ERVK-7P63135 1459 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 NDUFA10O95299 355 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 TRAPPC10P48553 1259 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 GOLGA5Q8TBA6 731 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 LRGUKQ96M69 825 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 TRIM10Q9UDY6 481 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 NUB1Q9Y5A7 615 aa16.71■□□□□ 0.27
FNDC1-201ENST00000297267 MYO5CQ9NQX4 1742 aa16.71■□□□□ 0.26
FNDC1-201ENST00000297267 PRDX5P30044 214 aa16.71■□□□□ 0.26
FNDC1-201ENST00000297267 TBC1D1Q86TI0 1168 aaPredicted RBP16.71■□□□□ 0.26
FNDC1-201ENST00000297267 NUCKS1Q9H1E3 243 aaKnown RBP16.71■□□□□ 0.26
FNDC1-201ENST00000297267 AS3MTQ9HBK9 375 aa16.71■□□□□ 0.26
FNDC1-201ENST00000297267 TEX33O43247 280 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 DKC1O60832 514 aaKnown RBP eCLIP16.7■□□□□ 0.26
FNDC1-201ENST00000297267 GGCXP38435 758 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 SLMAPQ14BN4 828 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 DBN1Q16643 649 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 PRCPP42785 496 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 DHX40Q8IX18 779 aaKnown RBP16.7■□□□□ 0.26
FNDC1-201ENST00000297267 ZNF507Q8TCN5 953 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 HESX1Q9UBX0 185 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 PDHA1P08559 390 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 POLR3EQ9NVU0 708 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 BEND6Q5SZJ8 279 aaPredicted RBP16.7■□□□□ 0.26
FNDC1-201ENST00000297267 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 RPS6KC1Q96S38 1066 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 VCXQ9H320 206 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 MSH2P43246 934 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 BBS9Q3SYG4 887 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 CCDC197Q8NCU1 140 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 TBC1D22AQ8WUA7 517 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 INSRP06213 1382 aa16.7■□□□□ 0.26
FNDC1-201ENST00000297267 HIP1RO75146 1068 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
FNDC1-201ENST00000297267 AOC3Q16853 763 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.69■□□□□ 0.26
FNDC1-201ENST00000297267 ATP6V1E2Q96A05 226 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 ARAP3Q8WWN8 1544 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 LRRD1A4D1F6 860 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 RNF8O76064 485 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 TUBBP07437 444 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 RFX1P22670 979 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 POLE2P56282 527 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 CACNB2Q08289 660 aaPredicted RBP16.69■□□□□ 0.26
FNDC1-201ENST00000297267 ADPGKQ9BRR6 497 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 HAUS4Q9H6D7 363 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 SNX24Q9Y343 169 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 CCDC78A2IDD5 438 aa16.69■□□□□ 0.26
FNDC1-201ENST00000297267 WDR46O15213 610 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms