RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ITGB5P18084 799 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 STAT3P40763 770 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 PPIL2Q13356 520 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 TRIM14Q14142 442 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 SAMD1Q6SPF0 538 aaPredicted RBP10.18□□□□□ -0.78
PDPN-201ENST00000294489 TUFT1Q9NNX1 390 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 SLC39A2Q9NP94 309 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 SSBP05455 408 aaKnown RBP eCLIP10.18□□□□□ -0.78
PDPN-201ENST00000294489 RPS6P62753 249 aaKnown RBP10.18□□□□□ -0.78
PDPN-201ENST00000294489 MRPS9P82933 396 aaKnown RBP10.18□□□□□ -0.78
PDPN-201ENST00000294489 UBXN1Q04323 297 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 RBL2Q08999 1139 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 PGM5Q15124 567 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 GPR162Q16538 588 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 SLC30A10Q6XR72 485 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 NAA15Q9BXJ9 866 aaKnown RBP10.18□□□□□ -0.78
PDPN-201ENST00000294489 JADE2Q9NQC1 790 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 PXMP2Q9NR77 195 aa10.18□□□□□ -0.78
PDPN-201ENST00000294489 EML1O00423 815 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 DHX15O43143 795 aaKnown RBP10.17□□□□□ -0.78
PDPN-201ENST00000294489 ARP10275 920 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 TREML2Q5T2D2 321 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 IRF2BP1Q8IU81 584 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 TMEM139Q8IV31 216 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 CPXCR1Q8N123 301 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 GUF1Q8N442 669 aaKnown RBP10.17□□□□□ -0.78
PDPN-201ENST00000294489 MB21D1Q8N884 522 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 KIAA0895Q8NCT3 520 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 IL31RAQ8NI17 732 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 KIF18AQ8NI77 898 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 CPLX3Q8WVH0 158 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 CCDC51Q96ER9 411 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 UIMC1Q96RL1 719 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 TEX13BQ9BXU2 312 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 RNF146Q9NTX7 359 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 PES1O00541 588 aaKnown RBP10.17□□□□□ -0.78
PDPN-201ENST00000294489 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
PDPN-201ENST00000294489 FGFR1OPO95684 399 aaKnown RBP10.17□□□□□ -0.78
PDPN-201ENST00000294489 PLA2G4BP0C869 781 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 NF2P35240 595 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 GTF2F1P35269 517 aaKnown RBP eCLIP10.17□□□□□ -0.78
PDPN-201ENST00000294489 ANKRD40Q6AI12 368 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 NCAPH2Q6IBW4 605 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 RNF207Q6ZRF8 634 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 SYT2Q8N9I0 419 aaPredicted RBP10.17□□□□□ -0.78
PDPN-201ENST00000294489 CNKSR2Q8WXI2 1034 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 TAAR1Q96RJ0 339 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
PDPN-201ENST00000294489 EIF2AK1Q9BQI3 630 aaKnown RBP10.17□□□□□ -0.78
PDPN-201ENST00000294489 WDR11Q9BZH6 1224 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 PCDHA2Q9Y5H9 948 aa10.17□□□□□ -0.78
PDPN-201ENST00000294489 GOLGA6L9A6NEM1 432 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 MFAP3LO75121 409 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 ARSHQ5FYA8 562 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 LRCH2Q5VUJ6 765 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 SNRNP48Q6IEG0 339 aaKnown RBP10.16□□□□□ -0.78
PDPN-201ENST00000294489 CENPPQ6IPU0 288 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 CCDC65Q8IXS2 484 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 AGO4Q9HCK5 861 aaKnown RBP10.16□□□□□ -0.78
PDPN-201ENST00000294489 LGALS16A8MUM7 142 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 E9PMD0 336 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 CYP11B2P19099 503 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 CASP14P31944 242 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 CHST13Q8NET6 341 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 HPS3Q969F9 1004 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 CLMNQ96JQ2 1002 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 TSG101Q99816 390 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 PDCD2LQ9BRP1 358 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 PANK4Q9NVE7 773 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 DNM3Q9UQ16 869 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 ARID2Q68CP9 1835 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 A0A1W2PQC6 194 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 SLITRK3O94933 977 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 GYPCP04921 128 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 KRT18P05783 430 aaKnown RBP10.16□□□□□ -0.78
PDPN-201ENST00000294489 DNM2P50570 870 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 LRRC63Q05C16 580 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 PRKG1Q13976 671 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 EPHA7Q15375 998 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 GPBP1Q86WP2 473 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 RIOX2Q8IUF8 465 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 NEK9Q8TD19 979 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 TUBGCP2Q9BSJ2 902 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 ZNF577Q9BSK1 485 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 UNC45AQ9H3U1 944 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 ACAD9Q9H845 621 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 ELP3Q9H9T3 547 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 CYP39A1Q9NYL5 469 aa10.16□□□□□ -0.78
PDPN-201ENST00000294489 CTDP1Q9Y5B0 961 aaPredicted RBP10.16□□□□□ -0.78
PDPN-201ENST00000294489 IPO5O00410 1097 aaKnown RBP10.15□□□□□ -0.78
PDPN-201ENST00000294489 CNMDO75829 334 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 KIF20AO95235 890 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 EYA4O95677 639 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 MTIF2P46199 727 aaKnown RBP10.15□□□□□ -0.78
PDPN-201ENST00000294489 UBXN2AP68543 259 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 COASYQ13057 564 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 FAM26FQ5R3K3 315 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 VSIG10LQ86VR7 867 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms