RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 MIGA2Q7L4E1 593 aa17.46■□□□□ 0.38
NCKIPSD-201ENST00000294129 ETNPPLQ8TBG4 499 aa17.46■□□□□ 0.38
NCKIPSD-201ENST00000294129 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.46■□□□□ 0.38
NCKIPSD-201ENST00000294129 DNM3Q9UQ16 869 aa17.46■□□□□ 0.38
NCKIPSD-201ENST00000294129 ERLIN1O75477 346 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 NR2F2P24468 414 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 MAGEA1P43355 309 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 SLC12A3P55017 1021 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 C2orf54Q08AI8 447 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 RAPGEF1Q13905 1077 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 ZCWPW2Q504Y3 356 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 KIAA1755Q5JYT7 1200 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 FAM83BQ5T0W9 1011 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 GSPT2Q8IYD1 628 aaKnown RBP17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 BAP1Q92560 729 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 REEP2Q9BRK0 252 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 GLT8D2Q9H1C3 349 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 PDE2AO00408 941 aaPredicted RBP17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 PLSCR1O15162 318 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 MSH4O15457 936 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 NCK2O43639 380 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 CTTNQ14247 550 aaKnown RBP17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 MSANTD4Q8NCY6 345 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 NAP1L4Q99733 375 aaKnown RBP17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 IKZF4Q9H2S9 585 aa17.45■□□□□ 0.38
NCKIPSD-201ENST00000294129 H3BQF6 201 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 OPLAHO14841 1288 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 PHACTR2O75167 634 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 MYBP10242 640 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 TNNT3P45378 269 aaPredicted RBP17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 AP3B2Q13367 1082 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 DCAF17Q5H9S7 520 aaPredicted RBP17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 TCERG1LQ5VWI1 586 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 FLAD1Q8NFF5 587 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 ERMNQ8TAM6 284 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 EHD2Q9NZN4 543 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 GREB1LQ9C091 1923 aaPredicted RBP17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 POTEB2H3BUK9 544 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 SPIRE1Q08AE8 756 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 PDXDC1Q6P996 788 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 LENG9Q96B70 501 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 PCDHA2Q9Y5H9 948 aa17.44■□□□□ 0.38
NCKIPSD-201ENST00000294129 EML1O00423 815 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 ZBTB39O15060 712 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 N4BP1O75113 896 aaKnown RBP17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 SPATA31C1P0DKV0 1188 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 ACTN1P12814 892 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 HYIQ5T013 277 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 TMOD2Q9NZR1 351 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 PKD2L1Q9P0L9 805 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 SALL4Q9UJQ4 1053 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 TACC1O75410 805 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 STAT2P52630 851 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 KCNA1Q09470 495 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 PAPD7Q5XG87 772 aaKnown RBP17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 NFRKBQ6P4R8 1299 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 TPH2Q8IWU9 490 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 FAM133AQ8N9E0 248 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 COG1Q8WTW3 980 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 PDGFDQ9GZP0 370 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 RAB21Q9UL25 225 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 A0A0U1RQG5 324 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 CLIC2O15247 247 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 GIT2Q14161 759 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 STYK1Q6J9G0 422 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 DNAAF5Q86Y56 855 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 CNKSR1Q969H4 720 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 GMCL1Q96IK5 515 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 RUSC1Q9BVN2 902 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 KCTD10Q9H3F6 313 aa17.43■□□□□ 0.38
NCKIPSD-201ENST00000294129 CYP3A7-CYP3A51PA0A087WV96 503 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 CETN3O15182 167 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 GCNT3O95395 438 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 CYP3A7P24462 503 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 SFMBT2Q5VUG0 894 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 HDXQ7Z353 690 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 GMCL1P1Q8NEA9 526 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 CCDC102AQ96A19 550 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 ATP8B1O43520 1251 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 NOL4O94818 638 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 SREBF1P36956 1147 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 KCNH2Q12809 1159 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 TSGA10Q9BZW7 698 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 PLEKHA4Q9H4M7 779 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
NCKIPSD-201ENST00000294129 CDK17Q00537 523 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 PTPROQ16827 1216 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 TAF3Q5VWG9 929 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 KSR1Q8IVT5 923 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 EIF2AK1Q9BQI3 630 aaKnown RBP17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 ZNF277Q9NRM2 450 aaPredicted RBP17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 TLR2O60603 784 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 TBCAO75347 108 aaKnown RBP17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 RPA1P27694 616 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 CASP8Q14790 479 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 SLC9C1Q4G0N8 1177 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms