RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SARM1Q6SZW1 724 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 SCYL3Q8IZE3 742 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 ANKRD13CQ8N6S4 541 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 KLHL29Q96CT2 875 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 MYO1AQ9UBC5 1043 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 LTN1O94822 1766 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 RPL13P26373 211 aaKnown RBP12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 COG2Q14746 738 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 ANKRD20A3Q5VUR7 823 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 APOA5Q6Q788 366 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 PEX26Q7Z412 305 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 CFAP57Q96MR6 1250 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 CLIC4Q9Y696 253 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 KCNJ18B7U540 433 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 H0YCG3 227 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 SH2B2O14492 632 aaPredicted RBP12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 MTMR2Q13614 643 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 KCNJ12Q14500 433 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 TKFCQ3LXA3 575 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 VWA3BQ502W6 1294 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 MIS18BP1Q6P0N0 1132 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 GIMAP8Q8ND71 665 aaPredicted RBP12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 NEDD1Q8NHV4 660 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 ATP6V0A1Q93050 837 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 PIGSQ96S52 555 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 TMEM51Q9NW97 253 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 ZSWIM5Q9P217 1185 aa12.4□□□□□ -0.42
NPC1L1-201ENST00000289547 ZNF609O15014 1411 aa12.4□□□□□ -0.43
NPC1L1-201ENST00000289547 SOWAHDA6NJG2 315 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ORC4O43929 436 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 FERP16591 822 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 SH3BGRP55822 239 aaPredicted RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 UAP1Q16222 522 aaPredicted RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 TAF12Q16514 161 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 SPATA1Q5VX52 437 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ERO1BQ86YB8 467 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ACRBPQ8NEB7 543 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 YIPF3Q9GZM5 350 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ACAD9Q9H845 621 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 KCNJ14Q9UNX9 436 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 GCFC2P16383 781 aaKnown RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 COG7P83436 770 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ASIC2Q16515 512 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 DCAF17Q5H9S7 520 aaPredicted RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ZBTB8OSQ8IWT0 167 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 METTL13Q8N6R0 699 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 GPKOWQ92917 476 aaPredicted RBP eCLIP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 CLIC6Q96NY7 704 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 TMEM39BQ9GZU3 492 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 DPH5Q9H2P9 285 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ASIC3Q9UHC3 531 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 DDX25Q9UHL0 483 aaKnown RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 MRC1P22897 1456 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ASB14A6NK59 587 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 KCNK3O14649 394 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 SPOPO43791 374 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 STAT3P40763 770 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 KLHL30Q0D2K2 578 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 CCDC84Q86UT8 332 aaPredicted RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 VSTM4Q8IW00 320 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 TEX2Q8IWB9 1127 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ANAPC4Q9UJX5 808 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 RCOR1Q9UKL0 485 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 RGPD8O14715 1765 aaPredicted RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 F5H6K3 240 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 BUB1O43683 1085 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 KLRC3Q07444 240 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 GBP7Q8N8V2 638 aaPredicted RBP12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 ARMC2Q8NEN0 867 aa12.39□□□□□ -0.43
NPC1L1-201ENST00000289547 LARGE1O95461 756 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 PPP4CP60510 307 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 RETREG2Q8NC44 543 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 PALM3A6NDB9 673 aaPredicted RBP12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 CASQ2O14958 399 aaPredicted RBP12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 NR1D1P20393 614 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 RBL2Q08999 1139 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 STXBP2Q15833 593 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 CEP95Q96GE4 821 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 TMEM47Q9BQJ4 181 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 RAB17Q9H0T7 212 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 MANSC4A6NHS7 340 aaPredicted RBP12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 UBE2Q2LH0YL09 131 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 FCGRTP55899 365 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 FAM133BQ5BKY9 247 aaKnown RBP12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms