RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 ARHGAP4P98171 946 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 IMMTQ16891 758 aaKnown RBP12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 GNPTABQ3T906 1256 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 UTP14CQ5TAP6 766 aaKnown RBP12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 CYFIP1Q7L576 1253 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 LMBR1Q8WVP7 490 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 PIGSQ96S52 555 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 GPR20Q99678 358 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 UPF3BQ9BZI7 483 aaKnown RBP12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 KRT23Q9C075 422 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 KCNH6Q9H252 994 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 RALGAPA2Q2PPJ7 1873 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 LINC01565O15544 149 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 CHRNA1P02708 482 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 RB1P06400 928 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 ADAM17P78536 824 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 SP4Q02446 784 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 SEMA3FQ13275 785 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 HDAC1Q13547 482 aaPredicted RBP12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 SEC23AQ15436 765 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 FAM26DQ5JW98 314 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 METTL7BQ6UX53 244 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 RNF135Q8IUD6 432 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 INPP4AQ96PE3 977 aaPredicted RBP12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 POP1Q99575 1024 aaKnown RBP12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 LMAN2LQ9H0V9 348 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 IGFLR1Q9H665 355 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 RC3H2Q9HBD1 1191 aaKnown RBP12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 DIAPH3Q9NSV4 1193 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 RTEL1Q9NZ71 1219 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 ZNF215Q9UL58 517 aaPredicted RBP12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 ATG2AQ2TAZ0 1938 aa12.43□□□□□ -0.42
NSMCE2-201ENST00000287437 TRIOO75962 3097 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 SPATA31C2B4DYI2 1134 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 ICAM3P32942 547 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 SMAD4Q13485 552 aaKnown RBP12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 NEDD9Q14511 834 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 HERC4Q5GLZ8 1057 aaPredicted RBP12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 CYB5R4Q7L1T6 521 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 PHOX2BQ99453 314 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 DSCC1Q9BVC3 393 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 RWDD3Q9Y3V2 267 aa12.42□□□□□ -0.42
NSMCE2-201ENST00000287437 FRMPD4Q14CM0 1322 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 STXBP3O00186 592 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 FIBPO43427 364 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 CYTH3O43739 400 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 MMP1P03956 469 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 RRP1P56182 461 aaKnown RBP12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 CAMK1Q14012 370 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 BTG3Q14201 252 aaPredicted RBP12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 LPIN1Q14693 890 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 GRM4Q14833 912 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 B4GALNT3Q6L9W6 998 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 CLP1Q92989 425 aaKnown RBP12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 RIOX1Q9H6W3 641 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 EHMT1Q9H9B1 1298 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 ALG13Q9NP73 1137 aaKnown RBP12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 CD207Q9UJ71 328 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 MYO7AQ13402 2215 aa12.41□□□□□ -0.42
NSMCE2-201ENST00000287437 NRCAMQ92823 1304 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 PNMA6FA0A0J9YX94 578 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 ENPP3O14638 875 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 STAM2O75886 525 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 NDUFV1P49821 464 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 MGAT3Q09327 533 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 TRAF1Q13077 416 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 ADAM15Q13444 863 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 PRSS33Q8NF86 280 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 EDAQ92838 391 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 ZNF689Q96CS4 500 aaPredicted RBP12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 IL25Q9H293 177 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 SENP2Q9HC62 589 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 PLAGL2Q9UPG8 496 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 ZNF318Q5VUA4 2279 aa12.4□□□□□ -0.42
NSMCE2-201ENST00000287437 DGKIO75912 1065 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 DNAJB1P25685 340 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 MARK3P27448 753 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 TCF7P36402 384 aaPredicted RBP12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 PPFIA1Q13136 1202 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 FBXO47Q5MNV8 452 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 IER5LQ5T953 404 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 TAF2Q6P1X5 1199 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 ADGRD2Q7Z7M1 963 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 DNAJB3Q8WWF6 145 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 LINC01599Q8WXQ3 324 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 MSLNLQ96KJ4 702 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 TUBE1Q9UJT0 475 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 MRPL42Q9Y6G3 142 aaKnown RBP12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 DOCK5Q9H7D0 1870 aa12.39□□□□□ -0.43
NSMCE2-201ENST00000287437 HIP1O00291 1037 aa12.38□□□□□ -0.43
NSMCE2-201ENST00000287437 ITGB1P05556 798 aa12.38□□□□□ -0.43
NSMCE2-201ENST00000287437 GRIK4Q16099 956 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms