RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 KRT76Q01546 638 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 ECM1Q16610 540 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 ZNF746Q6NUN9 644 aaPredicted RBP24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 DHX37Q8IY37 1157 aaKnown RBP24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 SH3TC2Q8TF17 1288 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 HSD17B14Q9BPX1 270 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 FAM184BQ9ULE4 1060 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 HPSEQ9Y251 543 aa24.53■■□□□ 1.52
PDLIM3-203ENST00000284771 FAM237AA0A1B0GTK4 181 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 GSTTP1A0A1W2PQM5 241 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 ATG7O95352 703 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 INHAP05111 366 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 SPATA31C1P0DKV0 1188 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 FSIP1Q8NA03 581 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 PANK2Q9BZ23 570 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 CCSER1Q9C0I3 900 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 DISC1Q9NRI5 854 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 RGL1Q9NZL6 768 aa24.52■■□□□ 1.52
PDLIM3-203ENST00000284771 MED24O75448 989 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 PFKFB1P16118 471 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 LIG1P18858 919 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 NDUFA8P51970 172 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 IRX5P78411 483 aaPredicted RBP24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 ABHD15Q6UXT9 468 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 MIER3Q7Z3K6 550 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 CTU1Q7Z7A3 348 aaKnown RBP24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 CATSPER3Q86XQ3 398 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 GPT2Q8TD30 523 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 MRPS27Q92552 414 aaKnown RBP24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 EIF2AK1Q9BQI3 630 aaKnown RBP24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 WDR81Q562E7 1941 aa24.51■■□□□ 1.51
PDLIM3-203ENST00000284771 SEPT4O43236 478 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 SLITRK3O94933 977 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 GH1P01241 217 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 AKR1A1P14550 325 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 CNGA1P29973 690 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 UBA7P41226 1012 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 SNW1Q13573 536 aaKnown RBP24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 KARSQ15046 597 aaKnown RBP24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 EPHA7Q15375 998 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 ENGASEQ8NFI3 743 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 LRRC15Q8TF66 581 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 EMID1Q96A84 441 aaPredicted RBP24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 SPATA33Q96N06 139 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 GPR20Q99678 358 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 WRAP73Q9P2S5 460 aaPredicted RBP24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 PCDHA10Q9Y5I2 948 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 DDX11L8A8MPP1 907 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 WDR64B1ANS9 1081 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 NKRFO15226 690 aaKnown RBP eCLIP24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 CYP4A11Q02928 519 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 LAMC2Q13753 1193 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 CABP7Q86V35 215 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 SMAP1Q8IYB5 467 aaPredicted RBP24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 SNX29Q8TEQ0 813 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 PNMA5Q96PV4 448 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 SAMM50Q9Y512 469 aa24.5■■□□□ 1.51
PDLIM3-203ENST00000284771 DYNC1LI2O43237 492 aaPredicted RBP24.49■■□□□ 1.51
PDLIM3-203ENST00000284771 SFNP31947 248 aa24.49■■□□□ 1.51
PDLIM3-203ENST00000284771 KRT79Q5XKE5 535 aa24.49■■□□□ 1.51
PDLIM3-203ENST00000284771 PDILTQ8N807 584 aa24.49■■□□□ 1.51
PDLIM3-203ENST00000284771 AFG1LQ8WV93 481 aa24.49■■□□□ 1.51
PDLIM3-203ENST00000284771 DYDC2Q96IM9 177 aa24.49■■□□□ 1.51
PDLIM3-203ENST00000284771 PLIN2Q99541 437 aa24.49■■□□□ 1.51
PDLIM3-203ENST00000284771 KCNH3Q9ULD8 1083 aa24.49■■□□□ 1.51
PDLIM3-203ENST00000284771 RPA1P27694 616 aa24.48■■□□□ 1.51
PDLIM3-203ENST00000284771 JAK3P52333 1124 aa24.48■■□□□ 1.51
PDLIM3-203ENST00000284771 GRB10Q13322 594 aa24.48■■□□□ 1.51
PDLIM3-203ENST00000284771 BANK1Q8NDB2 785 aa24.48■■□□□ 1.51
PDLIM3-203ENST00000284771 SEPT1Q8WYJ6 367 aa24.48■■□□□ 1.51
PDLIM3-203ENST00000284771 PCYT2Q99447 389 aa24.48■■□□□ 1.51
PDLIM3-203ENST00000284771 A0A087WWV3 80 aa24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 IGKV6D-21A0A0A0MT36 114 aa24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 NR1I2O75469 434 aa24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 CCT6AP40227 531 aaKnown RBP24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 CTTNQ14247 550 aaKnown RBP24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 ZRSR1Q15695 479 aaKnown RBP24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 UGCGQ16739 394 aa24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 TLK2Q86UE8 772 aa24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 CCDC60Q8IWA6 550 aaPredicted RBP24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 FMR1NBQ8N0W7 255 aaPredicted RBP24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 POLR3CQ9BUI4 534 aaPredicted RBP24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 FAM13BQ9NYF5 915 aa24.47■■□□□ 1.51
PDLIM3-203ENST00000284771 POTEB3A0JP26 581 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 CTAGE5O15320 804 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 POLR2DO15514 142 aaKnown RBP24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 DUSP11O75319 330 aaKnown RBP24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 TCF7P36402 384 aaPredicted RBP24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 NAALADL2Q58DX5 795 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 HYIQ5T013 277 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 SWSAP1Q6NVH7 229 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 POTEBQ6S5H4 581 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 RDM1Q8NG50 284 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 OR6J1Q8NGC5 347 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 PPTC7Q8NI37 304 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 Q9Y3F1 56 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 P4HBP07237 508 aaKnown RBP24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 SUPT20HL2P0C7V6 817 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 E2F4Q16254 413 aa24.46■■□□□ 1.51
PDLIM3-203ENST00000284771 KCNK18Q7Z418 384 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms