RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 VMP1Q96GC9 406 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 IDI2Q9BXS1 227 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 RAD18Q9NS91 495 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 ABCC4O15439 1325 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 MAP3K15Q6ZN16 1313 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 NRKQ7Z2Y5 1582 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 ASGR1P07306 291 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 SPIDRQ14159 915 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 CWF19L2Q2TBE0 894 aaKnown RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 AMZ1Q400G9 498 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 SLFN13Q68D06 897 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 ZBTB8OSQ8IWT0 167 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 DEPTORQ8TB45 409 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 CHMP6Q96FZ7 201 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 USB1Q9BQ65 265 aaKnown RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 OCEL1Q9H607 264 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 ZNF71Q9NQZ8 489 aaPredicted RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 COL17A1Q9UMD9 1497 aaPredicted RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 SCAMP3O14828 347 aaKnown RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 ALDH2P05091 517 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 PARP1P09874 1014 aaKnown RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 NAP1L1P55209 391 aaKnown RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 DDR1Q08345 913 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 TRPC3Q13507 836 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 SCYL2Q6P3W7 929 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 SPATA2LQ8IUW3 424 aaPredicted RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 FSIP1Q8NA03 581 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 CCDC112Q8NEF3 446 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 PDCD6IPQ8WUM4 868 aaKnown RBP3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 CCDC136Q96JN2 1154 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 STRADBQ9C0K7 418 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 CLMPQ9H6B4 373 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 LMAN1LQ9HAT1 526 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 EPB41L5Q9HCM4 733 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 JADE2Q9NQC1 790 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 TMPRSS4Q9NRS4 437 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 PREX1Q8TCU6 1659 aa3.99□□□□□ -1.77
SEMA3D-201ENST00000284136 A0A1B0GTW7 788 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ATG13O75143 517 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 CABYRO75952 493 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 SLC16A2P36021 539 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 SRP14P37108 136 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 CXCL12P48061 93 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 TWISTNBQ3B726 338 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 FNDC3BQ53EP0 1204 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 STRIP1Q5VSL9 837 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ACOT1Q86TX2 421 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 P3H2Q8IVL5 708 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ROBO2Q9HCK4 1378 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 RGS9O75916 674 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ADH1AP07327 375 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 NTSP30990 170 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 MTHFRP42898 656 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ATP1A2P50993 1020 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 STAT2P52630 851 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 EPHB3P54753 998 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 TYRO3Q06418 890 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 MTERF2Q49AM1 385 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 FAM102BQ5T8I3 360 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ZNF449Q6P9G9 518 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ZNF852Q6ZMS4 543 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 SV2AQ7L0J3 742 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 SPDYE1Q8NFV5 336 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ERCC4Q92889 916 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 RRP36Q96EU6 259 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 TMEM9BQ9NQ34 198 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ORC3Q9UBD5 711 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 LSM7Q9UK45 103 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 SMG5Q9UPR3 1016 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 USP16Q9Y5T5 823 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 NFKBIEO00221 500 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 SKAP2O75563 359 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 CNTN5O94779 1100 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 MOCS3O95396 460 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 PDGFRBP09619 1106 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 KDSRQ06136 332 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ACVR2BQ13705 512 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 RPAP2Q8IXW5 612 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 CCDC26Q8TAB7 109 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 PRMT6Q96LA8 375 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 CRAMP1Q96RY5 1269 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 SLC9A7Q96T83 725 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ACAD9Q9H845 621 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ZNF395Q9H8N7 513 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 TRMT13Q9NUP7 481 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 CUX1P39880 1505 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 GPATCH8Q9UKJ3 1502 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 MST1RQ04912 1400 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 A0A1W2PP64 1363 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 SBNO1A3KN83 1393 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 ANKRD36BQ8N2N9 1353 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 TNKSO95271 1327 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 TARSL2A2RTX5 802 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 RPP40O75818 363 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 COX6B1P14854 86 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 FSHRP23945 695 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 CSTF2P33240 577 aaKnown RBP eCLIP3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 PPATQ06203 517 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 TFCP2Q12800 502 aa3.98□□□□□ -1.77
SEMA3D-201ENST00000284136 CCDC178Q5BJE1 867 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms