RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 DNM3Q9UQ16 869 aa14.87□□□□□ -0.03
ACER3-201ENST00000278544 IQCB1Q15051 598 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 TPD52L1Q16890 204 aaPredicted RBP14.86□□□□□ -0.03
ACER3-201ENST00000278544 SWSAP1Q6NVH7 229 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 TRIM50Q86XT4 487 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 CCDC43Q96MW1 224 aaKnown RBP14.86□□□□□ -0.03
ACER3-201ENST00000278544 EXOC1Q9NV70 894 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 ATP2A1O14983 1001 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 CYP2B6P20813 491 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 HAUS3Q68CZ6 603 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 KSR1Q8IVT5 923 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 RUSC1Q9BVN2 902 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 RPTORQ8N122 1335 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 DHX15O43143 795 aaKnown RBP14.86□□□□□ -0.03
ACER3-201ENST00000278544 CDK11BP21127 795 aaKnown RBP14.86□□□□□ -0.03
ACER3-201ENST00000278544 SMC1BQ8NDV3 1235 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 NAT10Q9H0A0 1025 aaKnown RBP14.86□□□□□ -0.03
ACER3-201ENST00000278544 KBTBD4Q9NVX7 518 aa14.86□□□□□ -0.03
ACER3-201ENST00000278544 ARIH2O95376 493 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 PRCPP42785 496 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 IRX5P78411 483 aaPredicted RBP14.85□□□□□ -0.03
ACER3-201ENST00000278544 HERC4Q5GLZ8 1057 aaPredicted RBP14.85□□□□□ -0.03
ACER3-201ENST00000278544 MCTP2Q6DN12 878 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 ZNF784Q8NCA9 323 aaPredicted RBP14.85□□□□□ -0.03
ACER3-201ENST00000278544 LENG1Q96BZ8 264 aaPredicted RBP14.85□□□□□ -0.03
ACER3-201ENST00000278544 ZNF668Q96K58 619 aaPredicted RBP14.85□□□□□ -0.03
ACER3-201ENST00000278544 MED15Q96RN5 788 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 GABBR1Q9UBS5 961 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 FBXO40Q9UH90 709 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 MYPNQ86TC9 1320 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 ZBTB48P10074 688 aaPredicted RBP14.85□□□□□ -0.03
ACER3-201ENST00000278544 CRHR2Q13324 411 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 MORC3Q14149 939 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 NOC3LQ8WTT2 800 aaKnown RBP14.85□□□□□ -0.03
ACER3-201ENST00000278544 PARK7Q99497 189 aaKnown RBP14.85□□□□□ -0.03
ACER3-201ENST00000278544 TSKSQ9UJT2 592 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 NFE2L3Q9Y4A8 694 aa14.85□□□□□ -0.03
ACER3-201ENST00000278544 TMEM88BA6NKF7 163 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 USO1O60763 962 aaKnown RBP14.84□□□□□ -0.03
ACER3-201ENST00000278544 MYCP01106 439 aaPredicted RBP14.84□□□□□ -0.03
ACER3-201ENST00000278544 MOXD1Q6UVY6 613 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 ZBTB10Q96DT7 871 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 ARHGAP39Q9C0H5 1083 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 DOCK5Q9H7D0 1870 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 TBC1D8O95759 1140 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 RPA1P27694 616 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 PMS1P54277 932 aaKnown RBP14.84□□□□□ -0.03
ACER3-201ENST00000278544 SETQ01105 290 aaPredicted RBP14.84□□□□□ -0.03
ACER3-201ENST00000278544 GPR142Q7Z601 462 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 ZHX1Q9UKY1 873 aaPredicted RBP14.84□□□□□ -0.03
ACER3-201ENST00000278544 SARSP49591 514 aaKnown RBP14.84□□□□□ -0.03
ACER3-201ENST00000278544 FAM133AQ8N9E0 248 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 GPRC5CQ9NQ84 441 aa14.84□□□□□ -0.03
ACER3-201ENST00000278544 GGPS1O95749 300 aa14.83□□□□□ -0.03
ACER3-201ENST00000278544 SLC25A27O95847 323 aa14.83□□□□□ -0.03
ACER3-201ENST00000278544 GNPTABQ3T906 1256 aa14.83□□□□□ -0.03
ACER3-201ENST00000278544 MLXIPQ9HAP2 919 aa14.83□□□□□ -0.03
ACER3-201ENST00000278544 ADD3Q9UEY8 706 aaKnown RBP14.83□□□□□ -0.03
ACER3-201ENST00000278544 TBX3O15119 743 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 KLRC4O43908 158 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 CCNA1P78396 465 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 CCL14Q16627 93 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 ARSHQ5FYA8 562 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 PARP14Q460N5 1801 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 TOMM70O94826 608 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 ORC2Q13416 577 aaPredicted RBP14.83□□□□□ -0.04
ACER3-201ENST00000278544 TMEM119Q4V9L6 283 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 FILIP1Q7Z7B0 1213 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 ANKRD23Q86SG2 305 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 IFNL1Q8IU54 200 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 FGD4Q96M96 766 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 INPP4AQ96PE3 977 aaPredicted RBP14.83□□□□□ -0.04
ACER3-201ENST00000278544 HSD17B14Q9BPX1 270 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 REEP2Q9BRK0 252 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 JPH1Q9HDC5 661 aaPredicted RBP14.83□□□□□ -0.04
ACER3-201ENST00000278544 PANK4Q9NVE7 773 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 NRBP1Q9UHY1 535 aa14.83□□□□□ -0.04
ACER3-201ENST00000278544 PFASO15067 1338 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 PASKQ96RG2 1323 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 TRPA1O75762 1119 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 SERPINC1P01008 464 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 CYP11B2P19099 503 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 CYP2C19P33261 490 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 AMPD3Q01432 767 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 GPIHBP1Q8IV16 184 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 CCDC60Q8IWA6 550 aaPredicted RBP14.82□□□□□ -0.04
ACER3-201ENST00000278544 NELFBQ8WX92 580 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 GSDMAQ96QA5 445 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 NT5C3AQ9H0P0 336 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 IFNKQ9P0W0 207 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 KCNA2P16389 499 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 UBA1P22314 1058 aaKnown RBP14.82□□□□□ -0.04
ACER3-201ENST00000278544 HSDL1Q3SXM5 330 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 EIF3JO75822 258 aaKnown RBP14.82□□□□□ -0.04
ACER3-201ENST00000278544 ADCYAP1R1P41586 468 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 ACTR2P61160 394 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 XKR9Q5GH70 373 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 ARMCX2Q7L311 632 aa14.82□□□□□ -0.04
ACER3-201ENST00000278544 SLC9A2Q9UBY0 812 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms