RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ORC4O43929 436 aa14.01□□□□□ -0.17
HERC6-202ENST00000273960 PYGLP06737 847 aa14.01□□□□□ -0.17
HERC6-202ENST00000273960 ERFEQ4G0M1 354 aa14.01□□□□□ -0.17
HERC6-202ENST00000273960 USP38Q8NB14 1042 aa14.01□□□□□ -0.17
HERC6-202ENST00000273960 TSC22D3Q99576 134 aa14.01□□□□□ -0.17
HERC6-202ENST00000273960 KCNK9Q9NPC2 374 aa14.01□□□□□ -0.17
HERC6-202ENST00000273960 ARPP21Q9UBL0 812 aaPredicted RBP14.01□□□□□ -0.17
HERC6-202ENST00000273960 SPDYE5A6NIY4 337 aa14□□□□□ -0.17
HERC6-202ENST00000273960 CIAO1O76071 339 aa14□□□□□ -0.17
HERC6-202ENST00000273960 CCNE1P24864 410 aa14□□□□□ -0.17
HERC6-202ENST00000273960 ARID4AP29374 1257 aaPredicted RBP14□□□□□ -0.17
HERC6-202ENST00000273960 SLC8A3P57103 927 aa14□□□□□ -0.17
HERC6-202ENST00000273960 RASGRF1Q13972 1273 aa14□□□□□ -0.17
HERC6-202ENST00000273960 VWA3BQ502W6 1294 aa14□□□□□ -0.17
HERC6-202ENST00000273960 PAIP2Q9BPZ3 127 aaKnown RBP14□□□□□ -0.17
HERC6-202ENST00000273960 FGFR1OP2Q9NVK5 253 aa14□□□□□ -0.17
HERC6-202ENST00000273960 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
HERC6-202ENST00000273960 TECP42680 631 aa14□□□□□ -0.17
HERC6-202ENST00000273960 CACNB1Q02641 598 aaPredicted RBP14□□□□□ -0.17
HERC6-202ENST00000273960 LETM2Q2VYF4 491 aa14□□□□□ -0.17
HERC6-202ENST00000273960 SRBD1Q8N5C6 995 aaKnown RBP14□□□□□ -0.17
HERC6-202ENST00000273960 RNF26Q9BY78 433 aaPredicted RBP14□□□□□ -0.17
HERC6-202ENST00000273960 FAM205AQ6ZU69 1335 aa14□□□□□ -0.17
HERC6-202ENST00000273960 KIF1AQ12756 1690 aa14□□□□□ -0.17
HERC6-202ENST00000273960 SPDYE3A6NKU9 549 aa14□□□□□ -0.17
HERC6-202ENST00000273960 C11orf91Q3C1V1 193 aa14□□□□□ -0.17
HERC6-202ENST00000273960 ANKRD20A2Q5SQ80 823 aa14□□□□□ -0.17
HERC6-202ENST00000273960 ANKRD20A1Q5TYW2 823 aa14□□□□□ -0.17
HERC6-202ENST00000273960 ANKRD20A3Q5VUR7 823 aa14□□□□□ -0.17
HERC6-202ENST00000273960 CEP120Q8N960 986 aa14□□□□□ -0.17
HERC6-202ENST00000273960 GLG1Q92896 1179 aa14□□□□□ -0.17
HERC6-202ENST00000273960 SEMA6BQ9H3T3 888 aa14□□□□□ -0.17
HERC6-202ENST00000273960 DPPA5A6NC42 116 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 KLRC4O43908 158 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 ABL2P42684 1182 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 TUBP50607 506 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 CHRNDQ07001 517 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 KLHL30Q0D2K2 578 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 ZNF211Q13398 564 aaPredicted RBP13.99□□□□□ -0.17
HERC6-202ENST00000273960 SLC9C1Q4G0N8 1177 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 ANKIB1Q9P2G1 1089 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 ZMYND8Q9ULU4 1186 aaPredicted RBP13.99□□□□□ -0.17
HERC6-202ENST00000273960 SNX24Q9Y343 169 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 LMO7Q8WWI1 1683 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 NWD2Q9ULI1 1742 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 LINGO3P0C6S8 592 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 NQO1P15559 274 aaKnown RBP13.99□□□□□ -0.17
HERC6-202ENST00000273960 EPS15P42566 896 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 SFMBT2Q5VUG0 894 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 SPTY2D1Q68D10 685 aaPredicted RBP13.99□□□□□ -0.17
HERC6-202ENST00000273960 SLC30A9Q6PML9 568 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 HEATR3Q7Z4Q2 680 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 ESR2Q92731 530 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 PAGR1Q9BTK6 254 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 H0YGN5 161 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 RGS16O15492 202 aaPredicted RBP13.99□□□□□ -0.17
HERC6-202ENST00000273960 DNAJC8O75937 253 aaPredicted RBP13.99□□□□□ -0.17
HERC6-202ENST00000273960 SMNDC1O75940 238 aaKnown RBP eCLIP13.99□□□□□ -0.17
HERC6-202ENST00000273960 KRT13P13646 458 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
HERC6-202ENST00000273960 FAM114A1Q8IWE2 563 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 SETDB2Q96T68 719 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 ISCUQ9H1K1 167 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 VAT1LQ9HCJ6 419 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 NR2E1Q9Y466 385 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 NFS1Q9Y697 457 aa13.99□□□□□ -0.17
HERC6-202ENST00000273960 KDM3BQ7LBC6 1761 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 GRID2IPA4D2P6 1211 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 TRAF5O00463 557 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 KIF5BP33176 963 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 UBE3CQ15386 1083 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 GIMAP8Q8ND71 665 aaPredicted RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 DDX23Q9BUQ8 820 aaKnown RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 KDM4CQ9H3R0 1056 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 NOC2LQ9Y3T9 749 aaKnown RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 BMP15O95972 392 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 ACTN1P12814 892 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 PRLRP16471 622 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 RWDD2BP57060 319 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 TXNRD1Q16881 649 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 NUGGCQ68CJ6 796 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 CDCA2Q69YH5 1023 aaPredicted RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 CABP7Q86V35 215 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 CD302Q8IX05 232 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 EPS8L3Q8TE67 593 aaKnown RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 PICK1Q9NRD5 415 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 SEPT11Q9NVA2 429 aaKnown RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 BICDL2A1A5D9 508 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 KLHL33A6NCF5 533 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 UQCRFS1P1P0C7P4 283 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 FGFR4P22455 802 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 ECHS1P30084 290 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 CAVIN4Q5BKX8 364 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 SEPT14Q6ZU15 432 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 EBF2Q9HAK2 575 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 PAPOLBQ9NRJ5 636 aaKnown RBP13.98□□□□□ -0.17
HERC6-202ENST00000273960 SWAP70Q9UH65 585 aa13.98□□□□□ -0.17
HERC6-202ENST00000273960 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms