RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 GOLGA8BA8MQT2 603 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 AXIN1O15169 862 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 VAMP4O75379 141 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 MAP3K6O95382 1288 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 CCDC166P0CW27 439 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 LONP1P36776 959 aaKnown RBP9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 COG7P83436 770 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 RAB3GAP1Q15042 981 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 KLC3Q6P597 504 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 PANK1Q8TE04 598 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 FBF1Q8TES7 1133 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 SLC7A3Q8WY07 619 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 PDLIM2Q96JY6 352 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 SLX1AQ9BQ83 275 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 OSBPL3Q9H4L5 887 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 SPEF1Q9Y4P9 236 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 TMEM11P17152 192 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 IL32P24001 234 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 IFNA8P32881 189 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 TSPAN7P41732 249 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 SWSAP1Q6NVH7 229 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 PNMA8AQ86V59 439 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 TMEM87AQ8NBN3 555 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 CALML6Q8TD86 181 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 BCAS4Q8TDM0 211 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 SENP1Q9P0U3 644 aa9.63□□□□□ -0.87
CTDSPL-201ENST00000273179 NCAM1P13591 858 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 DNAJB1P25685 340 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 AMPHP49418 695 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 NEK3P51956 506 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 CDK17Q00537 523 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 LRRC74AQ0VAA2 488 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 INO80DQ53TQ3 878 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 GALNT15Q8N3T1 639 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 PJA1Q8NG27 643 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 SLC8A2Q9UPR5 921 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 PCDHGC5Q9Y5F6 944 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 HTR3EA5X5Y0 456 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 ENC1O14682 589 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 CBFA2T3O75081 653 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 CES1P23141 567 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 C6orf118Q5T5N4 469 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 HDXQ7Z353 690 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 GALNT7Q86SF2 657 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 NSMCE1Q8WV22 266 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 PRPF31Q8WWY3 499 aaKnown RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 ACAP3Q96P50 834 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 CORO1CQ9ULV4 474 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 NEO1Q92859 1461 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 ADGRB3O60242 1522 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 BCAR3O75815 825 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 BBOX1O75936 387 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 DDX58O95786 925 aaKnown RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 SERPINB8P50452 374 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 COTL1Q14019 142 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 IFNL3Q8IZI9 196 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 DDHD1Q8NEL9 900 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 CDKL2Q92772 493 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 PGBD4Q96DM1 585 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 DDX28Q9NUL7 540 aaKnown RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 SYNMO15061 1565 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 IFIT1P09914 478 aaKnown RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 EEF2P13639 858 aaKnown RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 LMOD1P29536 600 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 GSTO1P78417 241 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 BFSP1Q12934 665 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 CLUL1Q15846 466 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 CRY1Q16526 586 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 USP48Q86UV5 1035 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 SCAIQ8N9R8 606 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 ANKK1Q8NFD2 765 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 INPP5DQ92835 1189 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 TBCBQ99426 244 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 KRT23Q9C075 422 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 VPS33BQ9H267 617 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 XAB2Q9HCS7 855 aaKnown RBP9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 SCOCQ9UIL1 159 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 ANGPTL2Q9UKU9 493 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 TBX22Q9Y458 520 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 PPP2R3BQ9Y5P8 575 aa9.62□□□□□ -0.87
CTDSPL-201ENST00000273179 LAMC1P11047 1609 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 SGK1O00141 431 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 MYO1FO00160 1098 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 HIP1O00291 1037 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 PDE5AO76074 875 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 GAS8O95995 478 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 ABL1P00519 1130 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 DDR1Q08345 913 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 IFRD2Q12894 506 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 PAK2Q13177 524 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 KCTD16Q68DU8 428 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 SPARTQ8N0X7 666 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 BCL7CQ8WUZ0 217 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 BARD1Q99728 777 aaKnown RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 APOL5Q9BWW9 433 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 WDR6Q9NNW5 1121 aaKnown RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 TYW1Q9NV66 732 aaKnown RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 MTSS1O43312 755 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 SIN3BO75182 1162 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms