RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PPP1R2P41236 205 aa25.7■■□□□ 1.7
RAB40B-201ENST00000269347 NCBP1Q09161 790 aaKnown RBP25.7■■□□□ 1.7
RAB40B-201ENST00000269347 B3GNT9Q6UX72 402 aa25.7■■□□□ 1.7
RAB40B-201ENST00000269347 SFR1Q86XK3 245 aa25.7■■□□□ 1.7
RAB40B-201ENST00000269347 POLR3CQ9BUI4 534 aaPredicted RBP25.7■■□□□ 1.7
RAB40B-201ENST00000269347 WDR11Q9BZH6 1224 aa25.7■■□□□ 1.7
RAB40B-201ENST00000269347 ZNF112Q9UJU3 913 aa25.7■■□□□ 1.7
RAB40B-201ENST00000269347 REXO2Q9Y3B8 237 aaKnown RBP25.7■■□□□ 1.7
RAB40B-201ENST00000269347 SFI1A8K8P3 1242 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 ZSCAN12O43309 604 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 LPAR1Q92633 364 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 WRNIP1Q96S55 665 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 PPP1R9AQ9ULJ8 1098 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 CAPN11Q9UMQ6 739 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 PTPRAP18433 802 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 MRPS9P82933 396 aaKnown RBP25.69■■□□□ 1.7
RAB40B-201ENST00000269347 LRRC63Q05C16 580 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 PPP2R5CQ13362 524 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 GPIHBP1Q8IV16 184 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 TPH2Q8IWU9 490 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 CCDC65Q8IXS2 484 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 ERMNQ8TAM6 284 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 ATG4CQ96DT6 458 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 LZTFL1Q9NQ48 299 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 GGA3Q9NZ52 723 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 TFR2Q9UP52 801 aa25.69■■□□□ 1.7
RAB40B-201ENST00000269347 DICER1Q9UPY3 1922 aaKnown RBP25.68■■□□□ 1.7
RAB40B-201ENST00000269347 DDX39AO00148 427 aaKnown RBP25.68■■□□□ 1.7
RAB40B-201ENST00000269347 MYBP10242 640 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 KCNA1Q09470 495 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 TAAR1Q96RJ0 339 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 DNAJC7Q99615 494 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 NAA15Q9BXJ9 866 aaKnown RBP25.68■■□□□ 1.7
RAB40B-201ENST00000269347 L2HGDHQ9H9P8 463 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 GPRC5DQ9NZD1 345 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 SIK3Q9Y2K2 1263 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 PITPNM2Q9BZ72 1349 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 KRT18P05783 430 aaKnown RBP25.68■■□□□ 1.7
RAB40B-201ENST00000269347 SYTL5Q8TDW5 730 aaPredicted RBP25.68■■□□□ 1.7
RAB40B-201ENST00000269347 CCDC51Q96ER9 411 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 ZNF577Q9BSK1 485 aa25.68■■□□□ 1.7
RAB40B-201ENST00000269347 BMP2KQ9NSY1 1161 aaPredicted RBP25.68■■□□□ 1.7
RAB40B-201ENST00000269347 SLC26A4O43511 780 aa25.67■■□□□ 1.7
RAB40B-201ENST00000269347 VWA3BQ502W6 1294 aa25.67■■□□□ 1.7
RAB40B-201ENST00000269347 SCYL3Q8IZE3 742 aa25.67■■□□□ 1.7
RAB40B-201ENST00000269347 ERGIC2Q96RQ1 377 aa25.67■■□□□ 1.7
RAB40B-201ENST00000269347 MXRA8Q9BRK3 442 aa25.67■■□□□ 1.7
RAB40B-201ENST00000269347 GTPBP4Q9BZE4 634 aaKnown RBP25.67■■□□□ 1.7
RAB40B-201ENST00000269347 NDST4Q9H3R1 872 aa25.67■■□□□ 1.7
RAB40B-201ENST00000269347 KIF2AO00139 706 aaPredicted RBP25.66■■□□□ 1.7
RAB40B-201ENST00000269347 TRAF1Q13077 416 aa25.66■■□□□ 1.7
RAB40B-201ENST00000269347 PRKG1Q13976 671 aa25.66■■□□□ 1.7
RAB40B-201ENST00000269347 RINT1Q6NUQ1 792 aa25.66■■□□□ 1.7
RAB40B-201ENST00000269347 FAM114A1Q8IWE2 563 aa25.66■■□□□ 1.7
RAB40B-201ENST00000269347 GAS7O60861 476 aa25.66■■□□□ 1.7
RAB40B-201ENST00000269347 EYA4O95677 639 aa25.66■■□□□ 1.7
RAB40B-201ENST00000269347 TRIM14Q14142 442 aa25.66■■□□□ 1.7
RAB40B-201ENST00000269347 UPF1Q92900 1129 aaKnown RBP eCLIP25.66■■□□□ 1.7
RAB40B-201ENST00000269347 RABGAP1Q9Y3P9 1069 aa25.66■■□□□ 1.7
RAB40B-201ENST00000269347 PHLPP2Q6ZVD8 1323 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 TRAF5O00463 557 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 DHX15O43143 795 aaKnown RBP25.65■■□□□ 1.7
RAB40B-201ENST00000269347 CCP110O43303 1012 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 PRPF6O94906 941 aaKnown RBP25.65■■□□□ 1.7
RAB40B-201ENST00000269347 CCDC175P0C221 793 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 HMGCS2P54868 508 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 BACE1P56817 501 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 RPS6P62753 249 aaKnown RBP25.65■■□□□ 1.7
RAB40B-201ENST00000269347 APBA1Q02410 837 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 ITGB3BPQ13352 177 aaPredicted RBP25.65■■□□□ 1.7
RAB40B-201ENST00000269347 EPM2AIP1Q7L775 607 aaPredicted RBP25.65■■□□□ 1.7
RAB40B-201ENST00000269347 KCNH7Q9NS40 1196 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 LUC7L2Q9Y383 392 aaKnown RBP25.65■■□□□ 1.7
RAB40B-201ENST00000269347 IPO5O00410 1097 aaKnown RBP25.65■■□□□ 1.7
RAB40B-201ENST00000269347 GNG11P61952 73 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 ARHGAP27Q6ZUM4 889 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 BANK1Q8NDB2 785 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 OR8K1Q8NGG5 319 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 ZHX2Q9Y6X8 837 aa25.65■■□□□ 1.7
RAB40B-201ENST00000269347 VWA5AO00534 786 aa25.64■■□□□ 1.7
RAB40B-201ENST00000269347 ARHGAP25P42331 645 aa25.64■■□□□ 1.7
RAB40B-201ENST00000269347 GHRHRQ02643 423 aa25.64■■□□□ 1.7
RAB40B-201ENST00000269347 KCNMA1Q12791 1236 aa25.64■■□□□ 1.7
RAB40B-201ENST00000269347 TMTC1Q8IUR5 882 aa25.64■■□□□ 1.7
RAB40B-201ENST00000269347 SMCR8Q8TEV9 937 aaPredicted RBP25.64■■□□□ 1.7
RAB40B-201ENST00000269347 TRIM10Q9UDY6 481 aa25.64■■□□□ 1.7
RAB40B-201ENST00000269347 EIF2AK2P19525 551 aaKnown RBP25.63■■□□□ 1.69
RAB40B-201ENST00000269347 MAN2A1Q16706 1144 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 CYP26C1Q6V0L0 522 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 C1orf186Q6ZWK4 172 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 REPS2Q8NFH8 660 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 ANKRD7Q92527 254 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 PEX10O60683 326 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 TPM1P09493 284 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 TRIM21P19474 475 aaKnown RBP25.63■■□□□ 1.69
RAB40B-201ENST00000269347 ZNF280CQ8ND82 737 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 KLRG1Q96E93 195 aa25.63■■□□□ 1.69
RAB40B-201ENST00000269347 FAM207AQ9NSI2 230 aaPredicted RBP25.63■■□□□ 1.69
RAB40B-201ENST00000269347 PLEKP08567 350 aaPredicted RBP25.62■■□□□ 1.69
RAB40B-201ENST00000269347 FKBP3Q00688 224 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms