RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CTTNQ14247 550 aaKnown RBP18.25■□□□□ 0.51
TPM1-201ENST00000267996 PNMA3Q9UL41 463 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 MAPK8IP1Q9UQF2 711 aa18.25■□□□□ 0.51
TPM1-201ENST00000267996 TESPA1A2RU30 521 aaPredicted RBP18.24■□□□□ 0.51
TPM1-201ENST00000267996 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 PSMA7O14818 248 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 ERCC3P19447 782 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 CNTN2Q02246 1040 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 Q3C1V9 767 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 CST9Q5W186 159 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 MIER3Q7Z3K6 550 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 NCAPG2Q86XI2 1143 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 TPH2Q8IWU9 490 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 SPC24Q8NBT2 197 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 CDHR1Q96JP9 859 aa18.24■□□□□ 0.51
TPM1-201ENST00000267996 CBFA2T2O43439 604 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
TPM1-201ENST00000267996 EDNRBP24530 442 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 COASYQ13057 564 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 SPRYD7Q5W111 196 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 APTXQ7Z2E3 356 aaKnown RBP18.23■□□□□ 0.51
TPM1-201ENST00000267996 CCDC65Q8IXS2 484 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 HPS3Q969F9 1004 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 NACC1Q96RE7 527 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 SENP7Q9BQF6 1050 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 PANK4Q9NVE7 773 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 PKD2L1Q9P0L9 805 aa18.23■□□□□ 0.51
TPM1-201ENST00000267996 WRAP73Q9P2S5 460 aaPredicted RBP18.23■□□□□ 0.51
TPM1-201ENST00000267996 NFASCO94856 1347 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 CCL15-CCL14A0A0B4J2E2 113 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 SPATA31C2B4DYI2 1134 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 BTBD19C9JJ37 291 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 DDX39AO00148 427 aaKnown RBP18.22■□□□□ 0.51
TPM1-201ENST00000267996 TPM3P06753 285 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 P4HBP07237 508 aaKnown RBP18.22■□□□□ 0.51
TPM1-201ENST00000267996 IDEP14735 1019 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 KCNA2P16389 499 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 CCNE1P24864 410 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 ICAM3P32942 547 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 ALDH5A1P51649 535 aaPredicted RBP18.22■□□□□ 0.51
TPM1-201ENST00000267996 UBASH3AP57075 661 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 KRT76Q01546 638 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 CCL15Q16663 113 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 TTI2Q6NXR4 508 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 ANKRD23Q86SG2 305 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 GUF1Q8N442 669 aaKnown RBP18.22■□□□□ 0.51
TPM1-201ENST00000267996 SHCBP1Q8NEM2 672 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 RDM1Q8NG50 284 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 LXNQ9BS40 222 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 R3HDMLQ9H3Y0 253 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 MROH8Q9H579 483 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 SLC39A2Q9NP94 309 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 PCDHA2Q9Y5H9 948 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 KIAA1217Q5T5P2 1943 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 NPHP3-ACAD11A0A0J9YXS1 232 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 SOWAHBA6NEL2 793 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 EIF3JO75822 258 aaKnown RBP18.22■□□□□ 0.51
TPM1-201ENST00000267996 LYPLA2O95372 231 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 SERPINC1P01008 464 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 JAK3P52333 1124 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 PMS1P54277 932 aaKnown RBP18.22■□□□□ 0.51
TPM1-201ENST00000267996 GIT2Q14161 759 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 STXBP2Q15833 593 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 CHADLQ6NUI6 762 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 FOXR2Q6PJQ5 311 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 ZSCAN30Q86W11 494 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 DRC7Q8IY82 874 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 P2RX5Q93086 422 aa18.22■□□□□ 0.51
TPM1-201ENST00000267996 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
TPM1-201ENST00000267996 ADD3Q9UEY8 706 aaKnown RBP18.22■□□□□ 0.51
TPM1-201ENST00000267996 DNAJC25-GNG10A0A024R161 153 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 PDHXO00330 501 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 CCNE2O96020 404 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 CDK11BP21127 795 aaKnown RBP18.21■□□□□ 0.51
TPM1-201ENST00000267996 SFNP31947 248 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 ERVK-9P63128 1117 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 ERVK-24P63145 666 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 FAM26FQ5R3K3 315 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 CENPPQ6IPU0 288 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 ZNF746Q6NUN9 644 aaPredicted RBP18.21■□□□□ 0.51
TPM1-201ENST00000267996 RINT1Q6NUQ1 792 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 PIGOQ8TEQ8 1089 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 DUSP9Q99956 384 aaKnown RBP18.21■□□□□ 0.51
TPM1-201ENST00000267996 ZSWIM4Q9H7M6 989 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 INTS13Q9NVM9 706 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.21■□□□□ 0.51
TPM1-201ENST00000267996 NRBP1Q9UHY1 535 aa18.21■□□□□ 0.51
TPM1-201ENST00000267996 TRPM7Q96QT4 1865 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 LOXHD1Q8IVV2 1947 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 BICDL2A1A5D9 508 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 LRRC10BA6NIK2 292 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 ESPNB1AK53 854 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 WDR64B1ANS9 1081 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 COBLO75128 1261 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 CYP2C8P10632 490 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms