RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TRAF5O00463 557 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 NCK2O43639 380 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 GNA14O95837 355 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 IVLP07476 585 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 PLA2G4BP0C869 781 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 SLC16A2P36021 539 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 USP11P51784 963 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 SPIRE1Q08AE8 756 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 PICALMQ13492 652 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 NAB2Q15742 525 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 ALS2CR12Q96Q35 445 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 DEF6Q9H4E7 631 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 PSTPIP2Q9H939 334 aa13.73□□□□□ -0.21
BEST3-201ENST00000266661 ZNF277Q9NRM2 450 aaPredicted RBP13.73□□□□□ -0.21
BEST3-201ENST00000266661 CWC15Q9P013 229 aaKnown RBP13.73□□□□□ -0.21
BEST3-201ENST00000266661 FEZ2Q9UHY8 353 aaPredicted RBP13.73□□□□□ -0.21
BEST3-201ENST00000266661 SLC12A3P55017 1021 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 SLC20A2Q08357 652 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 MOXD1Q6UVY6 613 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 TMC4Q7Z404 712 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 SRLQ86TD4 932 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 ANKRD13CQ8N6S4 541 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 CAVIN3Q969G5 261 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 MKL1Q969V6 931 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 GDAP1L1Q96MZ0 367 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 NOX5Q96PH1 765 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 P2RX7Q99572 595 aaKnown RBP13.72□□□□□ -0.21
BEST3-201ENST00000266661 EHD4Q9H223 541 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 SMARCAL1Q9NZC9 954 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 EHD2Q9NZN4 543 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 RNF14Q9UBS8 474 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 PCDHGC5Q9Y5F6 944 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 EDRF1Q3B7T1 1238 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 SLC9C1Q4G0N8 1177 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 GLE1Q53GS7 698 aaKnown RBP13.72□□□□□ -0.21
BEST3-201ENST00000266661 SFMBT2Q5VUG0 894 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 APOBEC3HQ6NTF7 200 aaKnown RBP13.72□□□□□ -0.21
BEST3-201ENST00000266661 CDC42EP5Q6NZY7 148 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 LEKR1Q6ZMV7 388 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 CACNA2D4Q7Z3S7 1137 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 CCDC65Q8IXS2 484 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 DRC1Q96MC2 740 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 LSM14BQ9BX40 385 aaKnown RBP13.72□□□□□ -0.21
BEST3-201ENST00000266661 DNAJC18Q9H819 358 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 KIAA1024Q9UPX6 916 aa13.72□□□□□ -0.21
BEST3-201ENST00000266661 COL4A5P29400 1685 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 DICER1Q9UPY3 1922 aaKnown RBP13.71□□□□□ -0.21
BEST3-201ENST00000266661 NPHP3-ACAD11A0A0J9YXS1 232 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 BTNL10A8MVZ5 291 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 POTECB2RU33 542 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 C6orf229H3BNL8 230 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 MED24O75448 989 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 ERCC3P19447 782 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 CXCR5P32302 372 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 APBA1Q02410 837 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 SLC18A3Q16572 532 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 QRICH1Q2TAL8 776 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 HHIPL2Q6UWX4 724 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 KCTD1Q719H9 257 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 EPM2AIP1Q7L775 607 aaPredicted RBP13.71□□□□□ -0.21
BEST3-201ENST00000266661 GPIHBP1Q8IV16 184 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 ETNPPLQ8TBG4 499 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 CRACR2AQ9BSW2 395 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 GDF3Q9NR23 364 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.21
BEST3-201ENST00000266661 RBM12Q9NTZ6 932 aaKnown RBP13.71□□□□□ -0.21
BEST3-201ENST00000266661 STIM2Q9P246 746 aa13.71□□□□□ -0.21
BEST3-201ENST00000266661 SIPA1L1O43166 1804 aa13.71□□□□□ -0.22
BEST3-201ENST00000266661 USP17L15C9J2P7 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L13C9JLJ4 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L11C9JVI0 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L18D6R9N7 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L22D6RA61 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L17D6RBQ6 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L19D6RCP7 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L20D6RJB6 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 MEIS2O14770 477 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 CLSTN1O94985 981 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 SLURP2P0DP57 97 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 EPB41P11171 864 aaKnown RBP13.7□□□□□ -0.22
BEST3-201ENST00000266661 HOXD13P35453 343 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 POLR2FP61218 127 aaKnown RBP13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L24Q0WX57 530 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 MEI1Q5TIA1 1274 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 CCDC70Q6NSX1 233 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 EMBQ6PCB8 327 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 USP17L6PQ6QN14 398 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 SND1Q7KZF4 910 aaKnown RBP eCLIP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms