RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 HERC6Q8IVU3 1022 aa11.18□□□□□ -0.62
VPS41-201ENST00000265745 TMEM121BQ9BXQ6 578 aaPredicted RBP11.18□□□□□ -0.62
VPS41-201ENST00000265745 RNPEPQ9H4A4 650 aa11.18□□□□□ -0.62
VPS41-201ENST00000265745 BRPF3Q9ULD4 1205 aa11.18□□□□□ -0.62
VPS41-201ENST00000265745 ABHD14A-ACY1A0A1B0GW23 586 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 KIF28PB7ZC32 967 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 ATP9AO75110 1047 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 CA3P07451 260 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 SMIM10L2AP0DMW4 78 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 SMIM10L2BP0DMW5 78 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 IGFBP4P22692 258 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 KRT32Q14532 448 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 TCTN1Q2MV58 587 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 CNKSR3Q6P9H4 555 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 HEATR3Q7Z4Q2 680 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 ATP6V0A1Q93050 837 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 GPRASP2Q96D09 838 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 TCEANC2Q96MN5 208 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 RBM28Q9NW13 759 aaKnown RBP11.17□□□□□ -0.62
VPS41-201ENST00000265745 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 UBIAD1Q9Y5Z9 338 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 V9GY48 417 aaPredicted RBP11.17□□□□□ -0.62
VPS41-201ENST00000265745 VCANP13611 3396 aa11.17□□□□□ -0.62
VPS41-201ENST00000265745 EYSQ5T1H1 3165 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 CHD9Q3L8U1 2897 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 PRUNE2Q8WUY3 3088 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 C17orf102A2RUQ5 167 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 RBAK-RBAKDNI3L0D1 243 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 TREHO43280 583 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 ZBTB43O43298 467 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 ARHGEF15O94989 841 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 KCNA2P16389 499 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 THPOP40225 353 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 KCNJ6P48051 423 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 WDR5P61964 334 aaKnown RBP11.16□□□□□ -0.62
VPS41-201ENST00000265745 ADAM17P78536 824 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 TAP1Q03518 808 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 UBE2SQ16763 222 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 TRIM50Q86XT4 487 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 TEX2Q8IWB9 1127 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 GIMAP8Q8ND71 665 aaPredicted RBP11.16□□□□□ -0.62
VPS41-201ENST00000265745 PPM1EQ8WY54 764 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 KCNB2Q92953 911 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 CDHR1Q96JP9 859 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 PRDM6Q9NQX0 595 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
VPS41-201ENST00000265745 SETD4Q9NVD3 440 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 PCDHA6Q9UN73 950 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 PCDHA8Q9Y5H6 950 aa11.16□□□□□ -0.62
VPS41-201ENST00000265745 TTC28Q96AY4 2481 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 SPDYE3A6NKU9 549 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 RSPH10B2B2RC85 870 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 MAFGO15525 162 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 EFCAB14O75071 495 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 LGR5O75473 907 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
VPS41-201ENST00000265745 RSPH10BP0C881 870 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 GNAT1P11488 350 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 POU3F3P20264 500 aaPredicted RBP11.15□□□□□ -0.62
VPS41-201ENST00000265745 RCAN1P53805 252 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 SP4Q02446 784 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 IKBKEQ14164 716 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 CCDC85BQ15834 202 aaPredicted RBP11.15□□□□□ -0.62
VPS41-201ENST00000265745 RTN1Q16799 776 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 UTP14CQ5TAP6 766 aaKnown RBP11.15□□□□□ -0.62
VPS41-201ENST00000265745 TMCO2Q7Z6W1 182 aaPredicted RBP11.15□□□□□ -0.62
VPS41-201ENST00000265745 SEPT1Q8WYJ6 367 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 CERS4Q9HA82 394 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 RIC8AQ9NPQ8 531 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 JADE2Q9NQC1 790 aa11.15□□□□□ -0.62
VPS41-201ENST00000265745 ZNF215Q9UL58 517 aaPredicted RBP11.15□□□□□ -0.62
VPS41-201ENST00000265745 BAZ2BQ9UIF8 2168 aaKnown RBP11.15□□□□□ -0.62
VPS41-201ENST00000265745 EMSYQ7Z589 1322 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 CNTNAP5Q8WYK1 1306 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 GSTTP1A0A1W2PQM5 241 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 EPOPA6NHQ4 379 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 RFXAPO00287 272 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 TLL1O43897 1013 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 CAND2O75155 1236 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 FOSP01100 380 aaPredicted RBP11.14□□□□□ -0.63
VPS41-201ENST00000265745 CDC27P30260 824 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 HSPA4P34932 840 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 TCF7P36402 384 aaPredicted RBP11.14□□□□□ -0.63
VPS41-201ENST00000265745 DEFB103AP81534 67 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 MTMR1Q13613 665 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 DBF4BQ8NFT6 615 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 CYP2W1Q8TAV3 490 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 CCDC136Q96JN2 1154 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 RAD9AQ99638 391 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 OCEL1Q9H607 264 aa11.14□□□□□ -0.63
VPS41-201ENST00000265745 NRCAMQ92823 1304 aa11.13□□□□□ -0.63
VPS41-201ENST00000265745 LCHNA4D1U4 455 aa11.13□□□□□ -0.63
VPS41-201ENST00000265745 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
VPS41-201ENST00000265745 GOLGA8BA8MQT2 603 aa11.13□□□□□ -0.63
VPS41-201ENST00000265745 hCG_1984214I3L0E3 225 aa11.13□□□□□ -0.63
VPS41-201ENST00000265745 STXBP3O00186 592 aa11.13□□□□□ -0.63
VPS41-201ENST00000265745 GJB5O95377 273 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms