RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CYP2C9P11712 490 aa8.21□□□□□ -1.1
DEPDC1B-201ENST00000265036 ZNF200P98182 395 aaPredicted RBP8.21□□□□□ -1.1
DEPDC1B-201ENST00000265036 MDM2Q00987 491 aaPredicted RBP8.21□□□□□ -1.1
DEPDC1B-201ENST00000265036 MFSD10Q14728 455 aa8.21□□□□□ -1.1
DEPDC1B-201ENST00000265036 NOSTRINQ8IVI9 506 aa8.21□□□□□ -1.1
DEPDC1B-201ENST00000265036 CCDC60Q8IWA6 550 aaPredicted RBP8.21□□□□□ -1.1
DEPDC1B-201ENST00000265036 C16orf70Q9BSU1 422 aa8.21□□□□□ -1.1
DEPDC1B-201ENST00000265036 HDAC6Q9UBN7 1215 aa8.21□□□□□ -1.1
DEPDC1B-201ENST00000265036 EVPLQ92817 2033 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 MYO9BQ13459 2157 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 H3BRB1 525 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 ARVCFO00192 962 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 DHX15O43143 795 aaKnown RBP8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 ITGB8P26012 769 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 CIITAP33076 1130 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 PSEN2P49810 448 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 USP11P51784 963 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 IGBP1P78318 339 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 HIC1Q14526 733 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 SNX17Q15036 470 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 ZNF174Q15697 407 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 FOXD4L6Q3SYB3 417 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 MCTP2Q6DN12 878 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 FAM173BQ6P4H8 233 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 FOXD4L3Q6VB84 417 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 TUT1Q9H6E5 874 aaKnown RBP8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 PDLIM7Q9NR12 457 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 KIF3AQ9Y496 699 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 ELP1O95163 1332 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 LTBP2Q14767 1821 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 MARCH6O60337 910 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 NKX3-2P78367 333 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 FAAP100Q0VG06 881 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 GDF6Q6KF10 455 aaPredicted RBP8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 FAM126BQ8IXS8 530 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 ETNPPLQ8TBG4 499 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 TRAPPC12Q8WVT3 735 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 SNX21Q969T3 373 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 PCYT2Q99447 389 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 SH2D3AQ9BRG2 576 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 TMEM60Q9H2L4 133 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 UNC45AQ9H3U1 944 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 NOD1Q9Y239 953 aa8.2□□□□□ -1.1
DEPDC1B-201ENST00000265036 CHD7Q9P2D1 2997 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 TMEM150BA6NC51 233 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 TRIM43BA6NCK2 446 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 NEMFO60524 1076 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 PPFIA4O75335 1185 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 CLTBP09497 229 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 PKP1Q13835 747 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 UGCGQ16739 394 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 NIPA1Q7RTP0 329 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 TEX2Q8IWB9 1127 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 C7orf31Q8N865 590 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 GIMAP8Q8ND71 665 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 HAS1Q92839 578 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 TRIM43Q96BQ3 446 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 FTOQ9C0B1 505 aaKnown RBP eCLIP8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 FOXP1Q9H334 677 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 RNPEPQ9H4A4 650 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 PCDHB6Q9Y5E3 794 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 POTEMA6NI47 508 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 DCDC2CA8MYV0 355 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 MAFGO15525 162 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 CABYRO75952 493 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 HOXD8P13378 290 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 SYT1P21579 422 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 CYP2C18P33260 490 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 CYP4A11Q02928 519 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 Q4G0T1 1027 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 TTC38Q5R3I4 469 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 SWSAP1Q6NVH7 229 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 CHRDL2Q6WN34 429 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 SEPT1Q8WYJ6 367 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 SLC5A5Q92911 643 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 WNT8BQ93098 351 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 TEKT3Q9BXF9 490 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 AZI2Q9H6S1 392 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 SETD4Q9NVD3 440 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 PRKAG2Q9UGJ0 569 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 ZNF215Q9UL58 517 aaPredicted RBP8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 NR2E3Q9Y5X4 410 aa8.19□□□□□ -1.1
DEPDC1B-201ENST00000265036 NFASCO94856 1347 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 EML1O00423 815 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 PSMD10O75832 226 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 SUPT20HL2P0C7V6 817 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 SMIM10L2AP0DMW4 78 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 SMIM10L2BP0DMW5 78 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 TXKP42681 527 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 CDK7P50613 346 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 TOB1P50616 345 aaPredicted RBP8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 CCL23P55773 120 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 CALCRLQ16602 461 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 PTGISQ16647 500 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 NCAPH2Q6IBW4 605 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 CKAP2LQ8IYA6 745 aa8.18□□□□□ -1.1
DEPDC1B-201ENST00000265036 BANK1Q8NDB2 785 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms