RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 KCTD2Q14681 263 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 MESDQ14696 234 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 ADPGKQ9BRR6 497 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 E9PMD0 336 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 TEX33O43247 280 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 COASYQ13057 564 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 JPH2Q9BR39 696 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-201ENST00000264555 CCSER1Q9C0I3 900 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 ST7Q9NRC1 585 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 CEP72Q9P209 647 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 LRRN2O75325 713 aa18.21■□□□□ 0.5
PHRF1-201ENST00000264555 USP11P51784 963 aa18.21■□□□□ 0.5
PHRF1-201ENST00000264555 GNGT1P63211 74 aa18.21■□□□□ 0.5
PHRF1-201ENST00000264555 TFDP1Q14186 410 aa18.21■□□□□ 0.5
PHRF1-201ENST00000264555 FYB2Q5VWT5 728 aa18.21■□□□□ 0.5
PHRF1-201ENST00000264555 INTS5Q6P9B9 1019 aaKnown RBP18.21■□□□□ 0.5
PHRF1-201ENST00000264555 GUF1Q8N442 669 aaKnown RBP18.21■□□□□ 0.5
PHRF1-201ENST00000264555 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.5
PHRF1-201ENST00000264555 FEM1BQ9UK73 627 aa18.21■□□□□ 0.5
PHRF1-201ENST00000264555 MYO1FO00160 1098 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 STAM2O75886 525 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 TBC1D8O95759 1140 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 NOD1Q9Y239 953 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 FLT1P17948 1338 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 FTCDO95954 541 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 UBE2TQ9NPD8 197 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-201ENST00000264555 HEXIM1O94992 359 aaKnown RBP18.2■□□□□ 0.5
PHRF1-201ENST00000264555 TMOD1P28289 359 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
PHRF1-201ENST00000264555 RNF34Q969K3 372 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 HINFPQ9BQA5 517 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 MIS12Q9H081 205 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 DAGLAQ9Y4D2 1042 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 MST1RQ04912 1400 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 PSAPP07602 524 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 EIF2AK2P19525 551 aaKnown RBP18.2■□□□□ 0.5
PHRF1-201ENST00000264555 MXI1P50539 228 aa18.2■□□□□ 0.5
PHRF1-201ENST00000264555 TYW1Q9NV66 732 aaKnown RBP18.2■□□□□ 0.5
PHRF1-201ENST00000264555 FAM205CA6NFA0 338 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 TDP2O95551 362 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 KRT15P19012 456 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 PPP1R21Q6ZMI0 780 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 CAPS2Q9BXY5 557 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 FAM114A2Q9NRY5 505 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 PASKQ96RG2 1323 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 CXCR5P32302 372 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 PRELPP51888 382 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 C2orf54Q08AI8 447 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 PDIA5Q14554 519 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 FBXO38Q6PIJ6 1188 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 PIGOQ8TEQ8 1089 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 MAP3K14Q99558 947 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 ADAMTS1Q9UHI8 967 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 A0A1W2PQC6 194 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 USP27XA6NNY8 438 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 LGSNQ5TDP6 509 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 NAA35Q5VZE5 725 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 P3H4Q92791 437 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 EPB41L5Q9HCM4 733 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 M0QZ92 97 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 SFR1Q86XK3 245 aa18.19■□□□□ 0.5
PHRF1-201ENST00000264555 YARSP54577 528 aaKnown RBP18.18■□□□□ 0.5
PHRF1-201ENST00000264555 LACTBP83111 547 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-201ENST00000264555 HHATQ5VTY9 493 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 EXOC8Q8IYI6 725 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 RSAD2Q8WXG1 361 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 VPS37BQ9H9H4 285 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 ADGRG1Q9Y653 693 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 POTEB3A0JP26 581 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 POTECB2RU33 542 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 ALKBH5Q6P6C2 394 aaKnown RBP18.18■□□□□ 0.5
PHRF1-201ENST00000264555 POTEBQ6S5H4 581 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 BBOF1Q8ND07 529 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 ZNF653Q96CK0 615 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 PCDHB4Q9Y5E5 795 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 IFNB1P01574 187 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 SEPT14Q6ZU15 432 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 ENGASEQ8NFI3 743 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 ZMYND10O75800 440 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 CASP7P55210 303 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 DPYDQ12882 1025 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 PPP1R2P3Q6NXS1 205 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 RNF207Q6ZRF8 634 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 KCNF1Q9H3M0 494 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 RICTORQ6R327 1708 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 SFI1A8K8P3 1242 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 JAK3P52333 1124 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 CEP57Q86XR8 500 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 MAGOHBQ96A72 148 aaKnown RBP18.18■□□□□ 0.5
PHRF1-201ENST00000264555 HOMER3Q9NSC5 361 aa18.18■□□□□ 0.5
PHRF1-201ENST00000264555 PDS5AQ29RF7 1337 aaKnown RBP18.17■□□□□ 0.5
PHRF1-201ENST00000264555 MAN1A1P33908 653 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 ITIH3Q06033 890 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 C16orf86Q6ZW13 317 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 PPANQ9NQ55 473 aaKnown RBP18.17■□□□□ 0.5
PHRF1-201ENST00000264555 ABCB11O95342 1321 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 PABPN1LA6NDY0 278 aaKnown RBP18.17■□□□□ 0.5
PHRF1-201ENST00000264555 KCNJ6P48051 423 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 HACE1Q8IYU2 909 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms