RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PTF1AQ7RTS3 328 aa19.71■□□□□ 0.75
TRAF4-201ENST00000262395 UBLCP1Q8WVY7 318 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-201ENST00000262395 HAS1Q92839 578 aa19.71■□□□□ 0.75
TRAF4-201ENST00000262395 TAF1DQ9H5J8 278 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-201ENST00000262395 LRRC4CQ9HCJ2 640 aa19.71■□□□□ 0.75
TRAF4-201ENST00000262395 LUC7LQ9NQ29 371 aaKnown RBP19.71■□□□□ 0.75
TRAF4-201ENST00000262395 DDX25Q9UHL0 483 aaKnown RBP19.71■□□□□ 0.75
TRAF4-201ENST00000262395 SNED1Q8TER0 1413 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 POTEB3A0JP26 581 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 POTECB2RU33 542 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 ITGA4P13612 1032 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 POTEBQ6S5H4 581 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 ZNF571Q7Z3V5 609 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-201ENST00000262395 NEDD1Q8NHV4 660 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 TRIM31Q9BZY9 425 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 RNF14Q9UBS8 474 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 GOLGA6L10A6NI86 522 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 KRT18P05783 430 aaKnown RBP19.7■□□□□ 0.74
TRAF4-201ENST00000262395 STAT3P40763 770 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 KCNH2Q12809 1159 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 PICALMQ13492 652 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 UAP1Q16222 522 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-201ENST00000262395 TTBK2Q6IQ55 1244 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 TRIM59Q8IWR1 403 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 WDR66Q8TBY9 1149 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 CD248Q9HCU0 757 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 ABCB11O95342 1321 aa19.7■□□□□ 0.74
TRAF4-201ENST00000262395 PDHBP11177 359 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 CTNNA1P35221 906 aaKnown RBP19.69■□□□□ 0.74
TRAF4-201ENST00000262395 SF3B2Q13435 895 aaKnown RBP19.69■□□□□ 0.74
TRAF4-201ENST00000262395 TMEM119Q4V9L6 283 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 GPBP1Q86WP2 473 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 CNPY4Q8N129 248 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 WHAMMQ8TF30 809 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 SPAG5Q96R06 1193 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 CCDC88AQ3V6T2 1871 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 DCDC2CA8MYV0 355 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 SLURP2P0DP57 97 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 CASP5P51878 434 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 PRPF38AQ8NAV1 312 aaKnown RBP19.69■□□□□ 0.74
TRAF4-201ENST00000262395 JPH2Q9BR39 696 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-201ENST00000262395 RTFDC1Q9BY42 306 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-201ENST00000262395 AMACRQ9UHK6 382 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 PCDHA12Q9UN75 941 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 ROBO3Q96MS0 1386 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 ECHS1P30084 290 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 C16orf86Q6ZW13 317 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 ADAT2Q7Z6V5 191 aaKnown RBP19.69■□□□□ 0.74
TRAF4-201ENST00000262395 SCFD1Q8WVM8 642 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 CELF4Q9BZC1 486 aaKnown RBP19.69■□□□□ 0.74
TRAF4-201ENST00000262395 EDEM3Q9BZQ6 932 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 DPH5Q9H2P9 285 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 BCAS3Q9H6U6 928 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 TMBIM4Q9HC24 238 aa19.69■□□□□ 0.74
TRAF4-201ENST00000262395 GCOM1H8Y6P7 765 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-201ENST00000262395 SART1O43290 800 aaKnown RBP19.68■□□□□ 0.74
TRAF4-201ENST00000262395 DAPK3O43293 454 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 KIF4AO95239 1232 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 MYZAPP0CAP1 466 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 PSMD2Q13200 908 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 DCAF17Q5H9S7 520 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-201ENST00000262395 SLC10A5Q5PT55 438 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 GJB7Q6PEY0 223 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 PROM2Q8N271 834 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 MREGQ8N565 214 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 BMP2KQ9NSY1 1161 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-201ENST00000262395 EMILIN3Q9NT22 766 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 LAMB2P55268 1798 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 PPP1R11O60927 126 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-201ENST00000262395 PDIA5Q14554 519 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 QPCTQ16769 361 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 SPRED3Q2MJR0 410 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 TCERG1LQ5VWI1 586 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 CHADLQ6NUI6 762 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 GANQ9H2C0 597 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 FBXL5Q9UKA1 691 aa19.68■□□□□ 0.74
TRAF4-201ENST00000262395 HMGB1P1B2RPK0 211 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-201ENST00000262395 MEIS1O00470 390 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 NR2F2P24468 414 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 TM4SF1P30408 202 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 HSPA9P38646 679 aaKnown RBP19.67■□□□□ 0.74
TRAF4-201ENST00000262395 METTL13Q8N6R0 699 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 CABS1Q96KC9 395 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 PLA2G4BP0C869 781 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 NUCKS1Q9H1E3 243 aaKnown RBP19.67■□□□□ 0.74
TRAF4-201ENST00000262395 ISCUQ9H1K1 167 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 RIOX1Q9H6W3 641 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 ZNF287Q9HBT7 754 aa19.67■□□□□ 0.74
TRAF4-201ENST00000262395 NOVA2Q9UNW9 492 aaKnown RBP19.67■□□□□ 0.74
TRAF4-201ENST00000262395 MYH4Q9Y623 1939 aa19.66■□□□□ 0.74
TRAF4-201ENST00000262395 KRIT1O00522 736 aa19.66■□□□□ 0.74
TRAF4-201ENST00000262395 COPB2P35606 906 aa19.66■□□□□ 0.74
TRAF4-201ENST00000262395 GSTO1P78417 241 aa19.66■□□□□ 0.74
TRAF4-201ENST00000262395 ZNF844Q08AG5 666 aa19.66■□□□□ 0.74
TRAF4-201ENST00000262395 CD302Q8IX05 232 aa19.66■□□□□ 0.74
TRAF4-201ENST00000262395 SYN2Q92777 582 aaPredicted RBP19.66■□□□□ 0.74
TRAF4-201ENST00000262395 CYFIP2Q96F07 1278 aa19.66■□□□□ 0.74
TRAF4-201ENST00000262395 CNOT8Q9UFF9 292 aaKnown RBP19.66■□□□□ 0.74
TRAF4-201ENST00000262395 AJAP1Q9UKB5 411 aaPredicted RBP19.66■□□□□ 0.74
TRAF4-201ENST00000262395 HDAC9Q9UKV0 1011 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms