RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 PCDHA2Q9Y5H9 948 aa21.27■■□□□ 1
SCARB1-201ENST00000261693 PNMA6FA0A0J9YX94 578 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 NOVP48745 357 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 ASIC2Q16515 512 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 EMILIN3Q9NT22 766 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 PCDHGC5Q9Y5F6 944 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 NDUFAB1O14561 156 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 RAD51CO43502 376 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 STAT3P40763 770 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 SKOR1P84550 965 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 GUCY1A3Q02108 690 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 KCTD1Q719H9 257 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 CCDC65Q8IXS2 484 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 CUL5Q93034 780 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 RNPC3Q96LT9 517 aaKnown RBP21.26■□□□□ 0.99
SCARB1-201ENST00000261693 CEP63Q96MT8 703 aa21.26■□□□□ 0.99
SCARB1-201ENST00000261693 INPP4AQ96PE3 977 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-201ENST00000261693 CCNL1Q9UK58 526 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L10C9JJH3 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 F8W031 263 aaPredicted RBP21.25■□□□□ 0.99
SCARB1-201ENST00000261693 KCNK3O14649 394 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 RGL2O15211 777 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 RAD21O60216 631 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 KRT18P05783 430 aaKnown RBP21.25■□□□□ 0.99
SCARB1-201ENST00000261693 KCNH2Q12809 1159 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 RC3H1Q5TC82 1133 aaKnown RBP21.25■□□□□ 0.99
SCARB1-201ENST00000261693 CNBD1Q8NA66 436 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 KCTD10Q9H3F6 313 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L15C9J2P7 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L13C9JLJ4 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L11C9JVI0 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L18D6R9N7 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L22D6RA61 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L17D6RBQ6 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L19D6RCP7 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L20D6RJB6 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 PTK2Q05397 1052 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L24Q0WX57 530 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 USP17L6PQ6QN14 398 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 PSTPIP2Q9H939 334 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 ERLIN2O94905 339 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 SLURP2P0DP57 97 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 RFC4P35249 363 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 CLK2P49760 499 aaKnown RBP21.25■□□□□ 0.99
SCARB1-201ENST00000261693 ZNF543Q08ER8 600 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 PLCD3Q8N3E9 789 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 FAM107BQ9H098 131 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 GANQ9H2C0 597 aa21.25■□□□□ 0.99
SCARB1-201ENST00000261693 SLC9A1P19634 815 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 CASP5P51878 434 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 SEPT2Q15019 361 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 CDC37Q16543 378 aaPredicted RBP21.24■□□□□ 0.99
SCARB1-201ENST00000261693 CERS3Q8IU89 383 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 USP38Q8NB14 1042 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
SCARB1-201ENST00000261693 AIPL1Q9NZN9 384 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 GNA14O95837 355 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 SNHG28P0DPA3 235 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 ARHGAP27Q6ZUM4 889 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 MAATS1Q7Z4T9 603 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 TAF4BQ92750 862 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 NT5C3AQ9H0P0 336 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 CENPHQ9H3R5 247 aa21.24■□□□□ 0.99
SCARB1-201ENST00000261693 POTEFA5A3E0 1075 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 POTEIP0CG38 1075 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 CYP11B2P19099 503 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 NR2F2P24468 414 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 MRPL12P52815 198 aaKnown RBP21.23■□□□□ 0.99
SCARB1-201ENST00000261693 HLTFQ14527 1009 aaKnown RBP eCLIP21.23■□□□□ 0.99
SCARB1-201ENST00000261693 FOXR2Q6PJQ5 311 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 POTEGQ6S5H5 508 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 POTEEQ6S8J3 1075 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 ZNF571Q7Z3V5 609 aaPredicted RBP21.23■□□□□ 0.99
SCARB1-201ENST00000261693 KAT2BQ92831 832 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 GGA1Q9UJY5 639 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 DAGLAQ9Y4D2 1042 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 ARFGEF1Q9Y6D6 1849 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 TTLL1O95922 423 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 IL1R1P14778 569 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 RPS6KA1Q15418 735 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 AP1M1Q9BXS5 423 aa21.23■□□□□ 0.99
SCARB1-201ENST00000261693 NHSQ6T4R5 1651 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 MPHOSPH10O00566 681 aaKnown RBP21.22■□□□□ 0.99
SCARB1-201ENST00000261693 MED24O75448 989 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 ARSHQ5FYA8 562 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 SPAG5Q96R06 1193 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 DDX4Q9NQI0 724 aaKnown RBP21.22■□□□□ 0.99
SCARB1-201ENST00000261693 HDAC9Q9UKV0 1011 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 PLAAQ9Y263 795 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 KDM3AQ9Y4C1 1321 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 CETN3O15182 167 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 CEP104O60308 925 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 CPP00450 1065 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 NR1D1P20393 614 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 ICE2Q659A1 982 aa21.22■□□□□ 0.99
SCARB1-201ENST00000261693 DDX42Q86XP3 938 aaKnown RBP eCLIP21.22■□□□□ 0.998e-9■□□□□ 10.6
SCARB1-201ENST00000261693 GOLGB1Q14789 3259 aaKnown RBP21.21■□□□□ 0.99
SCARB1-201ENST00000261693 MEIS1O00470 390 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 LSP1P33241 339 aa21.21■□□□□ 0.99
SCARB1-201ENST00000261693 MARSP56192 900 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms