RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 ELF3P78545 371 aaPredicted RBP11.51□□□□□ -0.57
KPNA3-201ENST00000261667 MORC3Q14149 939 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 THOC7Q6I9Y2 204 aaKnown RBP11.51□□□□□ -0.57
KPNA3-201ENST00000261667 ZNF554Q86TJ5 538 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 FAM186BQ8IYM0 893 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 SYCE1Q8N0S2 351 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 UBL4BQ8N7F7 174 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 PLIN2Q99541 437 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 SLC39A2Q9NP94 309 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 TMCO1Q9UM00 188 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 ATP9AO75110 1047 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 ATP1A1P05023 1023 aaKnown RBP11.51□□□□□ -0.57
KPNA3-201ENST00000261667 LMNB1P20700 586 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CETN1Q12798 172 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CYTH1Q15438 398 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 ASIC2Q16515 512 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CEP55Q53EZ4 464 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CCDC84Q86UT8 332 aaPredicted RBP11.51□□□□□ -0.57
KPNA3-201ENST00000261667 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
KPNA3-201ENST00000261667 KCNH5Q8NCM2 988 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CALML6Q8TD86 181 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 AGAP11Q8TF27 550 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 ZSWIM6Q9HCJ5 1215 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 DAB2IPQ5VWQ8 1189 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 PDXDC1Q6P996 788 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 PPWD1Q96BP3 646 aaKnown RBP11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CCDC138Q96M89 665 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CCT7Q99832 543 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 RAB34Q9BZG1 259 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CRNKL1Q9BZJ0 848 aaKnown RBP11.51□□□□□ -0.57
KPNA3-201ENST00000261667 FGFR1OP2Q9NVK5 253 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 AMFRQ9UKV5 643 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 CLIC4Q9Y696 253 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 PASKQ96RG2 1323 aa11.51□□□□□ -0.57
KPNA3-201ENST00000261667 SPDYE3A6NKU9 549 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 OPLAHO14841 1288 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 LARGE1O95461 756 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 FTCDO95954 541 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 RXRAP19793 462 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 DCTN2Q13561 401 aaKnown RBP11.5□□□□□ -0.57
KPNA3-201ENST00000261667 VWA3BQ502W6 1294 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 RILPL1Q5EBL4 403 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 ZNF280DQ6N043 979 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 TRIM67Q6ZTA4 783 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 TRIM56Q9BRZ2 755 aaKnown RBP11.5□□□□□ -0.57
KPNA3-201ENST00000261667 FAM192AQ9GZU8 254 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 NAPBQ9H115 298 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 CUEDC2Q9H467 287 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 CEP126Q9P2H0 1117 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 A0A0G2JND7 137 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 MIS18BP1Q6P0N0 1132 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 WDR93Q6P2C0 686 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 CTAGE3PQ8IX95 158 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 NRBF2Q96F24 287 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 ANKZF1Q9H8Y5 726 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 ANO9A1A5B4 782 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 TCP11X1B4DZS4 312 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 C16orf72Q14CZ0 275 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 SFMBT2Q5VUG0 894 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 RBM12BQ8IXT5 1001 aaKnown RBP11.5□□□□□ -0.57
KPNA3-201ENST00000261667 SPATA4Q8NEY3 305 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 ENOX1Q8TC92 643 aaKnown RBP11.5□□□□□ -0.57
KPNA3-201ENST00000261667 PIGOQ8TEQ8 1089 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 LRCH1Q9Y2L9 728 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 ANGPTL3Q9Y5C1 460 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 NCOA3Q9Y6Q9 1424 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 HAUS5O94927 633 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 RABGAP1LQ5R372 815 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 SLC17A8Q8NDX2 589 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 TRAPPC9Q96Q05 1148 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 PRMT1Q99873 361 aaKnown RBP11.5□□□□□ -0.57
KPNA3-201ENST00000261667 IFT122Q9HBG6 1241 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 CABP5Q9NP86 173 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 WDR37Q9Y2I8 494 aa11.5□□□□□ -0.57
KPNA3-201ENST00000261667 COBLO75128 1261 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 GSTA1P08263 222 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 TMEM266Q2M3C6 531 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 CRELD2Q6UXH1 353 aaPredicted RBP11.49□□□□□ -0.57
KPNA3-201ENST00000261667 BLZF1Q9H2G9 400 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 AZI2Q9H6S1 392 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 WARS2Q9UGM6 360 aaKnown RBP11.49□□□□□ -0.57
KPNA3-201ENST00000261667 PACSIN2Q9UNF0 486 aaPredicted RBP11.49□□□□□ -0.57
KPNA3-201ENST00000261667 AOX1Q06278 1338 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 ADGRL3Q9HAR2 1447 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
KPNA3-201ENST00000261667 CHN1P15882 459 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 KCNA6P17658 529 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 PPIDQ08752 370 aaKnown RBP11.49□□□□□ -0.57
KPNA3-201ENST00000261667 TMEM259Q4ZIN3 620 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 YTHDF3Q7Z739 585 aaKnown RBP11.49□□□□□ -0.57
KPNA3-201ENST00000261667 STKLD1Q8NE28 680 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 TGS1Q96RS0 853 aaKnown RBP11.49□□□□□ -0.57
KPNA3-201ENST00000261667 RTEL1Q9NZ71 1219 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 FLT4P35916 1363 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 TRIM64CA6NLI5 447 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 POC1B-GALNT4F8VUJ3 575 aa11.49□□□□□ -0.57
KPNA3-201ENST00000261667 G3V3G9 751 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms