RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TMEM60Q9H2L4 133 aa23.33■■□□□ 1.33
RTCA-201ENST00000260563 BCAS3Q9H6U6 928 aa23.33■■□□□ 1.33
RTCA-201ENST00000260563 PCDHA7Q9UN72 937 aa23.33■■□□□ 1.33
RTCA-201ENST00000260563 MYADML2A6NDP7 307 aa23.33■■□□□ 1.32
RTCA-201ENST00000260563 DHX15O43143 795 aaKnown RBP23.33■■□□□ 1.32
RTCA-201ENST00000260563 OR52Z1P0C646 297 aa23.33■■□□□ 1.32
RTCA-201ENST00000260563 UBE2HP62256 183 aa23.33■■□□□ 1.32
RTCA-201ENST00000260563 C4orf32Q8N8J7 132 aa23.33■■□□□ 1.32
RTCA-201ENST00000260563 ARRDC4Q8NCT1 418 aa23.33■■□□□ 1.32
RTCA-201ENST00000260563 AFG1LQ8WV93 481 aa23.33■■□□□ 1.32
RTCA-201ENST00000260563 HAS1Q92839 578 aa23.33■■□□□ 1.32
RTCA-201ENST00000260563 GOLGA6L4A6NEF3 574 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 LAD1O00515 517 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 PSMD10O75832 226 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 TFRCP02786 760 aaKnown RBP23.32■■□□□ 1.32
RTCA-201ENST00000260563 MMP3P08254 477 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 CST5P28325 142 aaPredicted RBP23.32■■□□□ 1.32
RTCA-201ENST00000260563 NKX3-2P78367 333 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 BEX3Q00994 111 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 KRT76Q01546 638 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 LRRC41Q15345 812 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 HSDL1Q3SXM5 330 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 MTMR9Q96QG7 549 aa23.32■■□□□ 1.32
RTCA-201ENST00000260563 POTEFA5A3E0 1075 aa23.31■■□□□ 1.32
RTCA-201ENST00000260563 A6NJR5 290 aa23.31■■□□□ 1.32
RTCA-201ENST00000260563 CTAGE5O15320 804 aa23.31■■□□□ 1.32
RTCA-201ENST00000260563 ZEB2O60315 1214 aa23.31■■□□□ 1.32
RTCA-201ENST00000260563 CAPN2P17655 700 aa23.31■■□□□ 1.32
RTCA-201ENST00000260563 IRX5P78411 483 aaPredicted RBP23.31■■□□□ 1.32
RTCA-201ENST00000260563 GNASQ5JWF2 1037 aa23.31■■□□□ 1.32
RTCA-201ENST00000260563 KRI1Q8N9T8 703 aaKnown RBP23.31■■□□□ 1.32
RTCA-201ENST00000260563 KLHDC9Q8NEP7 349 aa23.31■■□□□ 1.32
RTCA-201ENST00000260563 FBXO2Q9UK22 296 aaPredicted RBP23.31■■□□□ 1.32
RTCA-201ENST00000260563 KBTBD13C9JR72 458 aa23.3■■□□□ 1.32
RTCA-201ENST00000260563 TXKP42681 527 aa23.3■■□□□ 1.32
RTCA-201ENST00000260563 TPRNQ4KMQ1 711 aa23.3■■□□□ 1.32
RTCA-201ENST00000260563 ARL6IP4Q66PJ3 421 aaKnown RBP23.3■■□□□ 1.32
RTCA-201ENST00000260563 ADALQ6DHV7 355 aa23.3■■□□□ 1.32
RTCA-201ENST00000260563 ZNF746Q6NUN9 644 aaPredicted RBP23.3■■□□□ 1.32
RTCA-201ENST00000260563 PCSK9Q8NBP7 692 aaKnown RBP23.3■■□□□ 1.32
RTCA-201ENST00000260563 GPR20Q99678 358 aa23.3■■□□□ 1.32
RTCA-201ENST00000260563 SRPRBQ9Y5M8 271 aaKnown RBP23.3■■□□□ 1.32
RTCA-201ENST00000260563 DNM1LO00429 736 aa23.29■■□□□ 1.32
RTCA-201ENST00000260563 CHMP2AO43633 222 aa23.29■■□□□ 1.32
RTCA-201ENST00000260563 DGKDQ16760 1214 aa23.29■■□□□ 1.32
RTCA-201ENST00000260563 AXDND1Q5T1B0 1012 aaPredicted RBP23.29■■□□□ 1.32
RTCA-201ENST00000260563 SMAP1Q8IYB5 467 aaPredicted RBP23.29■■□□□ 1.32
RTCA-201ENST00000260563 FERMT2Q96AC1 680 aa23.29■■□□□ 1.32
RTCA-201ENST00000260563 UNC45AQ9H3U1 944 aa23.29■■□□□ 1.32
RTCA-201ENST00000260563 TTC12Q9H892 705 aaPredicted RBP23.29■■□□□ 1.32
RTCA-201ENST00000260563 CUTAO60888 179 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 CCNE2O96020 404 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 PRPHP41219 470 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 ACTR2P61160 394 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 TMEM266Q2M3C6 531 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 ANKLE1Q8NAG6 615 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 VAV3Q9UKW4 847 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 PCDHA12Q9UN75 941 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 TELO2Q9Y4R8 837 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 WDR64B1ANS9 1081 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 TCF7P36402 384 aaPredicted RBP23.28■■□□□ 1.32
RTCA-201ENST00000260563 JAK3P52333 1124 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 PPP2R5CQ13362 524 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 KCNA10Q16322 511 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 SEPT1Q8WYJ6 367 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 CLIC6Q96NY7 704 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 SAMM50Q9Y512 469 aa23.28■■□□□ 1.32
RTCA-201ENST00000260563 SCN10AQ9Y5Y9 1956 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 A0A1W2PQ27 194 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 A0A1W2PQ64 194 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 A0A1W2PQD8 194 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 MOXD2PA6NHM9 499 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 CCDC85CA6NKD9 419 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 ASGR1P07306 291 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 MYL3P08590 195 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 HOXD8P13378 290 aaPredicted RBP23.27■■□□□ 1.32
RTCA-201ENST00000260563 SFNP31947 248 aa23.27■■□□□ 1.32
RTCA-201ENST00000260563 CCSAPQ6IQ19 270 aaPredicted RBP23.27■■□□□ 1.32
RTCA-201ENST00000260563 TSEN34Q9BSV6 310 aaKnown RBP23.27■■□□□ 1.32
RTCA-201ENST00000260563 GSTTP1A0A1W2PQM5 241 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 VWA3AA6NCI4 1184 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 PPFIA4O75335 1185 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 MBD3O95983 291 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 GRIN1Q05586 938 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 IL17AQ16552 155 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 MIS18BP1Q6P0N0 1132 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 B3GNT9Q6UX72 402 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 DTHD1Q6ZMT9 781 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 MIER3Q7Z3K6 550 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 ZNF579Q8NAF0 562 aaKnown RBP23.26■■□□□ 1.31
RTCA-201ENST00000260563 GPT2Q8TD30 523 aa23.26■■□□□ 1.31
RTCA-201ENST00000260563 KPNA6O60684 536 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 LGALS2P05162 132 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 ZNF286BP0CG31 522 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 TECP42680 631 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 PURAQ00577 322 aaKnown RBP23.25■■□□□ 1.31
RTCA-201ENST00000260563 SPIRE1Q08AE8 756 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 SKOR2Q2VWA4 1001 aaPredicted RBP23.25■■□□□ 1.31
RTCA-201ENST00000260563 NCAPH2Q6IBW4 605 aa23.25■■□□□ 1.31
RTCA-201ENST00000260563 RDM1Q8NG50 284 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms