RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 STRIP1Q5VSL9 837 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 MYLK4Q86YV6 388 aaPredicted RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 SRBD1Q8N5C6 995 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 ZNF248Q8NDW4 579 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 CHST13Q8NET6 341 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 OR6B3Q8NGW1 331 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 NEK9Q8TD19 979 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 DHX58Q96C10 678 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 TNIP3Q96KP6 325 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 XPO6Q96QU8 1125 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 SMARCAD1Q9H4L7 1026 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 LCMT1Q9UIC8 334 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 SLC25A13Q9UJS0 675 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 KLRF2D3W0D1 207 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 SGSM2O43147 1006 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 GDF11O95390 407 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 BRAFP15056 766 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 CASQ1P31415 396 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 AVPR1AP37288 418 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 TRAPPC10P48553 1259 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 OXCT1P55809 520 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 TFAMQ00059 246 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 PPARAQ07869 468 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 THOC5Q13769 683 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 SCARF1Q14162 830 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 CEP55Q53EZ4 464 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 ZNF771Q7L3S4 317 aaPredicted RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 SYCE1Q8N0S2 351 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 SPICE1Q8N0Z3 855 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 LRRC47Q8N1G4 583 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 CENPSQ8N2Z9 138 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 PNMA1Q8ND90 353 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 VPS39Q96JC1 886 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 FOXP3Q9BZS1 431 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 DRC3Q9H069 523 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 VPS37BQ9H9H4 285 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 DBR1Q9UK59 544 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 PCDHB11Q9Y5F2 797 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 V9GY48 417 aaPredicted RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 TTLL13PA6NNM8 815 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 GPAA1O43292 621 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 TOMM70O94826 608 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 ITGA4P13612 1032 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 PAMP19021 973 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 ATICP31939 592 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 PPM1AP35813 382 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 GYG1P46976 350 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 PAPOLAP51003 745 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 CASP6P55212 293 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 C21orf59P57076 290 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 IRX4P78413 519 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 LAMC2Q13753 1193 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 SEPT6Q14141 434 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 RCN2Q14257 317 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 KRT40Q6A162 431 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 TOGARAM2Q6ZUX3 1019 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 MAATS1Q7Z4T9 603 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 P3H4Q92791 437 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 USP13Q92995 863 aaPredicted RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 ZKSCAN4Q969J2 545 aaPredicted RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 HVCN1Q96D96 273 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 WNK4Q96J92 1243 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 PPP1R13BQ96KQ4 1090 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 NT5C1BQ96P26 610 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 TRERF1Q96PN7 1200 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 RMDN3Q96TC7 470 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 CNPPD1Q9BV87 410 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 NEUROG2Q9H2A3 272 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 CTTNBP2NLQ9P2B4 639 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 ZBTB1Q9Y2K1 713 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 MYPNQ86TC9 1320 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 MEIS1O00470 390 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 ASAP2O43150 1006 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 CHEK2O96017 543 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 RPL10AP62906 217 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 TUBB4BP68371 445 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 DAB2P98082 770 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 ADCY1Q08828 1119 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 PDIA6Q15084 440 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 ASIC2Q16515 512 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 CWF19L2Q2TBE0 894 aaKnown RBP4.37□□□□□ -1.71
RNF38-201ENST00000259605 ZNF667Q5HYK9 610 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 THEMIS2Q5TEJ8 643 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 HHIPL2Q6UWX4 724 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 SSH1Q8WYL5 1049 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 IFT43Q96FT9 208 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 RPGRIP1Q96KN7 1286 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 NUDCD1Q96RS6 583 aa4.37□□□□□ -1.71
RNF38-201ENST00000259605 C17orf102A2RUQ5 167 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MYMKA6NI61 221 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 VSTM5A8MXK1 200 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SORBS3O60504 671 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MYO1DO94832 1006 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MLYCDO95822 493 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SCG2P13521 617 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 KRT15P19012 456 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ITGAXP20702 1163 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 PCSK1P29120 753 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 MLLT1Q03111 559 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms