RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 DDX12PQ92771 950 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.95□□□□□ -1.3
BRIP1-201ENST00000259008 FOXP1Q9H334 677 aaPredicted RBP6.95□□□□□ -1.3
BRIP1-201ENST00000259008 ENTPD7Q9NQZ7 604 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 TOPORSQ9NS56 1045 aaPredicted RBP6.95□□□□□ -1.3
BRIP1-201ENST00000259008 TMEM39AQ9NV64 488 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 BRPF3Q9ULD4 1205 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 CLDN3O15551 220 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 TADA2AO75478 443 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 ATP2A2P16615 1042 aaKnown RBP6.95□□□□□ -1.3
BRIP1-201ENST00000259008 CAP2P40123 477 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 RBM10P98175 930 aaKnown RBP6.95□□□□□ -1.3
BRIP1-201ENST00000259008 PDIA6Q15084 440 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 KLHL40Q2TBA0 621 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF569Q5MCW4 686 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 RNF219Q5W0B1 726 aaPredicted RBP6.95□□□□□ -1.3
BRIP1-201ENST00000259008 SIRT2Q8IXJ6 389 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 UBL4BQ8N7F7 174 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 NCAPGQ9BPX3 1015 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 SH2D3AQ9BRG2 576 aa6.95□□□□□ -1.3
BRIP1-201ENST00000259008 SENP6Q9GZR1 1112 aaPredicted RBP6.95□□□□□ -1.3
BRIP1-201ENST00000259008 TSPYL2Q9H2G4 693 aaPredicted RBP6.95□□□□□ -1.3
BRIP1-201ENST00000259008 C17orf102A2RUQ5 167 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 A6NJR5 290 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 IPO5O00410 1097 aaKnown RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 FDX1P10109 184 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 SKILP12757 684 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 NR2F2P24468 414 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 MAPK4P31152 587 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 TKFCQ3LXA3 575 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 IER5Q5VY09 327 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 POTEDQ86YR6 584 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 UBR1Q8IWV7 1749 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 TMEM206Q9H813 350 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 SLC38A10Q9HBR0 1119 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 MTMR4Q9NYA4 1195 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 CPSF3Q9UKF6 684 aaKnown RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 BCL9O00512 1426 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 POTEB3A0JP26 581 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 WNT10BO00744 389 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 GADD45BO75293 160 aaPredicted RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 CYP27A1Q02318 531 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 CKAP4Q07065 602 aaKnown RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 NFIAQ12857 509 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 CC2D1AQ6P1N0 951 aaPredicted RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 POTEBQ6S5H4 581 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 MOB2Q70IA6 237 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 FBXO16Q8IX29 292 aaPredicted RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 PGBD3Q8N328 593 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF653Q96CK0 615 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 TSGA10Q9BZW7 698 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 PPP2R3BQ9Y5P8 575 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 ABCC12Q96J65 1359 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 KCNJ18B7U540 433 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 GOLGA8SH3BPF8 625 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 FKTNO75072 461 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 PSMC2P35998 433 aaKnown RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 KCNJ12Q14500 433 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 KAZNQ674X7 775 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 PADI6Q6TGC4 694 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 LEKR1Q6ZMV7 388 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 CCDC186Q7Z3E2 898 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 TXNRD3Q86VQ6 643 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 GRAMD1CQ8IYS0 662 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 NT5C1BQ96P26 610 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 YME1L1Q96TA2 773 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 MAP3K20Q9NYL2 800 aaKnown RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 SUCLA2Q9P2R7 463 aaPredicted RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 PRR12Q9ULL5 1215 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 NOC2LQ9Y3T9 749 aaKnown RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 RIOK3O14730 519 aaKnown RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 GPC3P51654 580 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 MFAP3P55082 362 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 POLR2FP61218 127 aaKnown RBP6.94□□□□□ -1.3
BRIP1-201ENST00000259008 RAB3IL1Q8TBN0 382 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 IFT81Q8WYA0 676 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 SYNDIG1Q9H7V2 258 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 PCDHB6Q9Y5E3 794 aa6.94□□□□□ -1.3
BRIP1-201ENST00000259008 HUS1O60921 280 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 PLCG1P19174 1290 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 MCM3P25205 808 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 CACNB2Q08289 660 aaPredicted RBP6.93□□□□□ -1.3
BRIP1-201ENST00000259008 CNGA4Q8IV77 575 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 SMYD4Q8IYR2 804 aaPredicted RBP6.93□□□□□ -1.3
BRIP1-201ENST00000259008 MLKLQ8NB16 471 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 BEST2Q8NFU1 509 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 CCT6BQ92526 530 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 LXNQ9BS40 222 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 KIF2AO00139 706 aaPredicted RBP6.93□□□□□ -1.3
BRIP1-201ENST00000259008 RAG1P15918 1043 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 GCLCP48506 637 aaPredicted RBP6.93□□□□□ -1.3
BRIP1-201ENST00000259008 BACE1P56817 501 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF394Q53GI3 561 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 RGMBQ6NW40 437 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 FAM186BQ8IYM0 893 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 CCDC89Q8N998 374 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 RNF149Q8NC42 400 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 BBXQ8WY36 941 aaPredicted RBP6.93□□□□□ -1.3
BRIP1-201ENST00000259008 ABCF3Q9NUQ8 709 aa6.93□□□□□ -1.3
BRIP1-201ENST00000259008 NFE2L3Q9Y4A8 694 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms