RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 STAMQ92783 540 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 CCDC34Q96HJ3 373 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 UIMC1Q96RL1 719 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 PPP1R9BQ96SB3 815 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 PLIN2Q99541 437 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 LCTP09848 1927 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 TBX3O15119 743 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 AP5Z1O43299 807 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 MSCO60682 206 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 CYBAP13498 195 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 CCDC173Q0VFZ6 552 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 GRB10Q13322 594 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 PRAMEF19Q5SWL8 479 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 MAMDC4Q6UXC1 1216 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 DHX40Q8IX18 779 aaKnown RBP19.59■□□□□ 0.73
SRSF1-201ENST00000258962 RASSF8Q8NHQ8 419 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 PNMA5Q96PV4 448 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 RAB34Q9BZG1 259 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 EHMT1Q9H9B1 1298 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 PCDHA12Q9UN75 941 aa19.59■□□□□ 0.73
SRSF1-201ENST00000258962 ASB14A6NK59 587 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 GTPBP6O43824 516 aaPredicted RBP19.58■□□□□ 0.73
SRSF1-201ENST00000258962 MARCH6O60337 910 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 MORC3Q14149 939 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 SLC30A10Q6XR72 485 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 SLFN12Q8IYM2 578 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 SAMD3Q8N6K7 520 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 TRPV1Q8NER1 839 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 SYTL5Q8TDW5 730 aaPredicted RBP19.58■□□□□ 0.73
SRSF1-201ENST00000258962 PDLIM2Q96JY6 352 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 BPIFA3Q9BQP9 254 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 MAF1Q9H063 256 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 CRISPLD2Q9H0B8 497 aa19.58■□□□□ 0.73
SRSF1-201ENST00000258962 MAP3K20Q9NYL2 800 aaKnown RBP19.58■□□□□ 0.73
SRSF1-201ENST00000258962 ADD3Q9UEY8 706 aaKnown RBP19.58■□□□□ 0.73
SRSF1-201ENST00000258962 DDX20Q9UHI6 824 aaKnown RBP19.58■□□□□ 0.73
SRSF1-201ENST00000258962 FRMPD4Q14CM0 1322 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 MSH4O15457 936 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 SEPT4O43236 478 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 SMC2O95347 1197 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 SPIRE1Q08AE8 756 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 CUL4BQ13620 913 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 TRIML1Q8N9V2 468 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 NAT10Q9H0A0 1025 aaKnown RBP19.57■□□□□ 0.72
SRSF1-201ENST00000258962 BLZF1Q9H2G9 400 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 CUEDC2Q9H467 287 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 PLXNA1Q9UIW2 1896 aa19.57■□□□□ 0.72
SRSF1-201ENST00000258962 SOWAHBA6NEL2 793 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 SNAI1O95863 264 aaPredicted RBP19.56■□□□□ 0.72
SRSF1-201ENST00000258962 ZNF76P36508 570 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 RPS6P62753 249 aaKnown RBP19.56■□□□□ 0.72
SRSF1-201ENST00000258962 TMEM119Q4V9L6 283 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 ARMCX2Q7L311 632 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 AOPEPQ8N6M6 819 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 SNX29Q8TEQ0 813 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 CALML4Q96GE6 196 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 FAM20AQ96MK3 541 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 MPHOSPH6Q99547 160 aaKnown RBP19.56■□□□□ 0.72
SRSF1-201ENST00000258962 KBTBD4Q9NVX7 518 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.56■□□□□ 0.72
SRSF1-201ENST00000258962 FARP2O94887 1054 aaPredicted RBP19.56■□□□□ 0.72
SRSF1-201ENST00000258962 KRT79Q5XKE5 535 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 LHX8Q68G74 356 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 IL31RAQ8NI17 732 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 FGD4Q96M96 766 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 GSDMAQ96QA5 445 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 ABHD16BQ9H3Z7 469 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 MAGEF1Q9HAY2 307 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 ZHX1Q9UKY1 873 aaPredicted RBP19.56■□□□□ 0.72
SRSF1-201ENST00000258962 OGDHLQ9ULD0 1010 aa19.56■□□□□ 0.72
SRSF1-201ENST00000258962 B4DLN1 442 aa19.55■□□□□ 0.72
SRSF1-201ENST00000258962 ACVR2BQ13705 512 aa19.55■□□□□ 0.72
SRSF1-201ENST00000258962 ANKLE1Q8NAG6 615 aa19.55■□□□□ 0.72
SRSF1-201ENST00000258962 ZFP91Q96JP5 570 aaPredicted RBP19.55■□□□□ 0.72
SRSF1-201ENST00000258962 TAAR1Q96RJ0 339 aa19.55■□□□□ 0.72
SRSF1-201ENST00000258962 BLOC1S4Q9NUP1 217 aa19.55■□□□□ 0.72
SRSF1-201ENST00000258962 VAV3Q9UKW4 847 aa19.55■□□□□ 0.72
SRSF1-201ENST00000258962 ECM1Q16610 540 aa19.54■□□□□ 0.72
SRSF1-201ENST00000258962 CEP55Q53EZ4 464 aa19.54■□□□□ 0.72
SRSF1-201ENST00000258962 HYIQ5T013 277 aa19.54■□□□□ 0.72
SRSF1-201ENST00000258962 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
SRSF1-201ENST00000258962 DNERQ8NFT8 737 aa19.54■□□□□ 0.72
SRSF1-201ENST00000258962 PURBQ96QR8 312 aaKnown RBP19.54■□□□□ 0.72
SRSF1-201ENST00000258962 STK17AQ9UEE5 414 aa19.54■□□□□ 0.72
SRSF1-201ENST00000258962 FAM184BQ9ULE4 1060 aa19.54■□□□□ 0.72
SRSF1-201ENST00000258962 LOC102724159A0A0B4J2E5 919 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 MEIS1O00470 390 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 ADCY5O95622 1261 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 ZNF865P0CJ78 1059 aaPredicted RBP19.53■□□□□ 0.72
SRSF1-201ENST00000258962 RARBP10826 455 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 AKR1A1P14550 325 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 NCAPHQ15003 741 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 PWP2Q15269 919 aaKnown RBP19.53■□□□□ 0.72
SRSF1-201ENST00000258962 KCNK18Q7Z418 384 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 MLKLQ8NB16 471 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 SLC5A5Q92911 643 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 MXRA8Q9BRK3 442 aa19.53■□□□□ 0.72
SRSF1-201ENST00000258962 BECN2A8MW95 431 aa19.52■□□□□ 0.72
SRSF1-201ENST00000258962 GOLGA6L19H0YKK7 550 aa19.52■□□□□ 0.72
SRSF1-201ENST00000258962 RPN1P04843 607 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms