RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SARM1Q6SZW1 724 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 RFPL4BQ6ZWI9 263 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 ZGPATQ8N5A5 531 aaKnown RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 CDC26Q8NHZ8 85 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 DIS3LQ8TF46 1054 aaKnown RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 NCSTNQ92542 709 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 TSR2Q969E8 191 aaKnown RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 NXPE3Q969Y0 559 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 AZIN2Q96A70 460 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 LENG1Q96BZ8 264 aaPredicted RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 HAUS1Q96CS2 278 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 CEP95Q96GE4 821 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 C12orf4Q9NQ89 552 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 CNGB3Q9NQW8 809 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 HSFX1Q9UBD0 423 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 INTUQ9ULD6 942 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 PCDHB6Q9Y5E3 794 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 FAM47E-STBD1D6RA91 191 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 CCNT1O60563 726 aaKnown RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 SLC4A1P02730 911 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 S100BP04271 92 aaPredicted RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 CHRNB1P11230 501 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 MTHFRP42898 656 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 BLVRAP53004 296 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 NFIAQ12857 509 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 FLIIQ13045 1269 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 ESCO1Q5FWF5 840 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 KLC3Q6P597 504 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 TUBGCP5Q96RT8 1024 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 SLF1Q9BQI6 1058 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 RIC8AQ9NPQ8 531 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 PDP2Q9P2J9 529 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 CRNNQ9UBG3 495 aaPredicted RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 SERPINA10Q9UK55 444 aa8.41□□□□□ -1.06
GPNMB-201ENST00000258733 GPC6Q9Y625 555 aaPredicted RBP8.41□□□□□ -1.06
GPNMB-201ENST00000258733 ITGA2BP08514 1039 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 GSTA2P09210 222 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 KRT4P19013 534 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 IL32P24001 234 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 GBP1P32455 592 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 MCL1Q07820 350 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
GPNMB-201ENST00000258733 ZMYM1Q5SVZ6 1142 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 TMEM154Q6P9G4 183 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 GALNT7Q86SF2 657 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 PHLDB2Q86SQ0 1253 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 USP48Q86UV5 1035 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 CADM3Q8N126 398 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 NOA1Q8NC60 698 aaKnown RBP8.4□□□□□ -1.06
GPNMB-201ENST00000258733 SLC22A8Q8TCC7 542 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 MPHOSPH9Q99550 1183 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 FHDC1Q9C0D6 1143 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-201ENST00000258733 KLHL4Q9C0H6 718 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 C8orf4Q9NR00 106 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 PREX2Q70Z35 1606 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 KANSL1LA0AUZ9 987 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 FIBPO43427 364 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 PRMT3O60678 531 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 TOP1P11387 765 aaKnown RBP8.4□□□□□ -1.06
GPNMB-201ENST00000258733 CTRB1P17538 263 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 RFC5P40937 340 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 KPNA1P52294 538 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-201ENST00000258733 HPCAP84074 193 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 LSAMPQ13449 338 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 CDONQ4KMG0 1287 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 OLFML2BQ68BL8 750 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 CEP68Q76N32 757 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 FAM133AQ8N9E0 248 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 GOT1L1Q8NHS2 421 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-201ENST00000258733 STON2Q8WXE9 905 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 STARD8Q92502 1023 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 AIFM2Q9BRQ8 373 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 FAM192AQ9GZU8 254 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 SMARCAD1Q9H4L7 1026 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 PPCSQ9HAB8 311 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 CD93Q9NPY3 652 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 ZNF277Q9NRM2 450 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-201ENST00000258733 LIMCH1Q9UPQ0 1083 aa8.4□□□□□ -1.06
GPNMB-201ENST00000258733 RNF113AO15541 343 aaKnown RBP8.4□□□□□ -1.07
GPNMB-201ENST00000258733 GNRH1P01148 92 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 ZKSCAN1P17029 563 aaPredicted RBP8.4□□□□□ -1.07
GPNMB-201ENST00000258733 CFL1P23528 166 aaKnown RBP8.4□□□□□ -1.07
GPNMB-201ENST00000258733 CCNG1P51959 295 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 ADARP55265 1226 aaKnown RBP8.4□□□□□ -1.07
GPNMB-201ENST00000258733 NFE2L1Q14494 772 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 FOXB2Q5VYV0 432 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 NAA35Q5VZE5 725 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 TRIM68Q6AZZ1 485 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 OR52E8Q6IFG1 317 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 C6orf89Q6UWU4 347 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 SPATA2LQ8IUW3 424 aaPredicted RBP8.4□□□□□ -1.07
GPNMB-201ENST00000258733 FAM186BQ8IYM0 893 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 AGAP11Q8TF27 550 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 TSGA13Q96PP4 275 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 MIS12Q9H081 205 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 PIF1Q9H611 641 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 STK32BQ9NY57 414 aa8.4□□□□□ -1.07
GPNMB-201ENST00000258733 COL4A3BPQ9Y5P4 624 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms