RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 SLC9A2Q9UBY0 812 aa16.18■□□□□ 0.18
CNN1-201ENST00000252456 CYP3A7-CYP3A51PA0A087WV96 503 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 FAM205CA6NFA0 338 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 IPO5O00410 1097 aaKnown RBP16.17■□□□□ 0.18
CNN1-201ENST00000252456 TDP2O95551 362 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 MMP1P03956 469 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 CYP2C9P11712 490 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 CYP3A7P24462 503 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 HOXC8P31273 242 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 FOSBP53539 338 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 NONOQ15233 471 aaKnown RBP eCLIP16.17■□□□□ 0.18
CNN1-201ENST00000252456 INF2Q27J81 1249 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 HABP4Q5JVS0 413 aaKnown RBP16.17■□□□□ 0.18
CNN1-201ENST00000252456 KRT40Q6A162 431 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 SEPT1Q8WYJ6 367 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 PPP1R12CQ9BZL4 782 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 SCN5AQ14524 2016 aa16.17■□□□□ 0.18
CNN1-201ENST00000252456 CYP2C18P33260 490 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 EPHB4P54760 987 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 ACTR2P61160 394 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 UTP14CQ5TAP6 766 aaKnown RBP16.16■□□□□ 0.18
CNN1-201ENST00000252456 MFSD5Q6N075 450 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 C7orf31Q8N865 590 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 SDF4Q9BRK5 362 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 ZNF577Q9BSK1 485 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 UBE2OQ9C0C9 1292 aaKnown RBP16.16■□□□□ 0.18
CNN1-201ENST00000252456 WNT8AQ9H1J5 351 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 HIPK3Q9H422 1215 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 EMSYQ7Z589 1322 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 DDX39AO00148 427 aaKnown RBP16.16■□□□□ 0.18
CNN1-201ENST00000252456 MSH4O15457 936 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 LGR5O75473 907 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 ATG7O95352 703 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 SUPT20HL2P0C7V6 817 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 KRT2P35908 639 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 HMGN5P82970 282 aaKnown RBP16.16■□□□□ 0.18
CNN1-201ENST00000252456 PTGISQ16647 500 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 Q4G0T1 1027 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 MOXD1Q6UVY6 613 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 PIK3AP1Q6ZUJ8 805 aa16.16■□□□□ 0.18
CNN1-201ENST00000252456 KAT6AQ92794 2004 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 CCDC194A0A1B0GVG4 234 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 A0A1W2PPC1 479 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 BTBD18B2RXH4 712 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 SMIM10L2AP0DMW4 78 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 SMIM10L2BP0DMW5 78 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 ZNF200P98182 395 aaPredicted RBP16.15■□□□□ 0.18
CNN1-201ENST00000252456 DIS3L2Q8IYB7 885 aaKnown RBP16.15■□□□□ 0.18
CNN1-201ENST00000252456 DHX38Q92620 1227 aaKnown RBP16.15■□□□□ 0.18
CNN1-201ENST00000252456 SLC5A5Q92911 643 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 GJA10Q969M2 543 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 VWCEQ96DN2 955 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 RNPEPQ9H4A4 650 aa16.15■□□□□ 0.18
CNN1-201ENST00000252456 IGKV6D-21A0A0A0MT36 114 aa16.14■□□□□ 0.17
CNN1-201ENST00000252456 SLC37A4O43826 429 aa16.14■□□□□ 0.17
CNN1-201ENST00000252456 GUCY1B3Q02153 619 aa16.14■□□□□ 0.17
CNN1-201ENST00000252456 ABHD15Q6UXT9 468 aa16.14■□□□□ 0.17
CNN1-201ENST00000252456 NEK8Q86SG6 692 aa16.14■□□□□ 0.17
CNN1-201ENST00000252456 TDHQ8IZJ6 230 aa16.14■□□□□ 0.17
CNN1-201ENST00000252456 WNT8BQ93098 351 aa16.14■□□□□ 0.17
CNN1-201ENST00000252456 TBC1D22BQ9NU19 505 aa16.14■□□□□ 0.17
CNN1-201ENST00000252456 ZNF215Q9UL58 517 aaPredicted RBP16.14■□□□□ 0.17
CNN1-201ENST00000252456 MYH9P35579 1960 aaKnown RBP16.14■□□□□ 0.17
CNN1-201ENST00000252456 CSF2RAP15509 400 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 MCM2P49736 904 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 ADAM17P78536 824 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 FPGSQ05932 587 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 LETM2Q2VYF4 491 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 C9orf50Q5SZB4 431 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 C16orf59Q7L2K0 433 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 FBXO18Q8NFZ0 1043 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 ETNPPLQ8TBG4 499 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 C8orf76Q96K31 380 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 TET1Q8NFU7 2136 aa16.13■□□□□ 0.17
CNN1-201ENST00000252456 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 WNT7AO00755 349 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 PSMD10O75832 226 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 MARK3P27448 753 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 CCL23P55773 120 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 RBL2Q08999 1139 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 TRIM29Q14134 588 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 TRIM71Q2Q1W2 868 aaKnown RBP16.12■□□□□ 0.17
CNN1-201ENST00000252456 PPP4R3AQ6IN85 833 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 B3GNT9Q6UX72 402 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 CCDC60Q8IWA6 550 aaPredicted RBP16.12■□□□□ 0.17
CNN1-201ENST00000252456 RIT2Q99578 217 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 SMARCAD1Q9H4L7 1026 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 BRMS1Q9HCU9 246 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 KCNMB3Q9NPA1 279 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 ERAP1Q9NZ08 941 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 DDX25Q9UHL0 483 aaKnown RBP16.12■□□□□ 0.17
CNN1-201ENST00000252456 ZNF746Q6NUN9 644 aaPredicted RBP16.12■□□□□ 0.17
CNN1-201ENST00000252456 SERINC5Q86VE9 423 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 GLG1Q92896 1179 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 SCLYQ96I15 445 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 NOD1Q9Y239 953 aa16.12■□□□□ 0.17
CNN1-201ENST00000252456 SIP14410 1827 aa16.11■□□□□ 0.17
CNN1-201ENST00000252456 C17orf102A2RUQ5 167 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms