RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 TRMT1Q9NXH9 659 aaKnown RBP26■■□□□ 1.75
SYNGR3-201ENST00000248121 KIAA1217Q5T5P2 1943 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 EML1O00423 815 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 RPA1P27694 616 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 PGM5Q15124 567 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 CEP135Q66GS9 1140 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 GLIS3Q8NEA6 775 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 ACAD9Q9H845 621 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 EHMT1Q9H9B1 1298 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 CYP39A1Q9NYL5 469 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 N4BP3O15049 544 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 PPP1R2P41236 205 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 TERF1P54274 439 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 SLC12A3P55017 1021 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 PSMC6P62333 389 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 CENPPQ6IPU0 288 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 CCDC112Q8NEF3 446 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 RMDN3Q96TC7 470 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 WDR11Q9BZH6 1224 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 PXMP2Q9NR77 195 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 PNMA2Q9UL42 364 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 SSBP05455 408 aaKnown RBP eCLIP25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 CYP11B2P19099 503 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 CREBRFQ8IUR6 639 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 CSGALNACT2Q8N6G5 542 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 C2orf69Q8N8R5 385 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 EEF2KMTQ96G04 330 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 SPATC1LQ9H0A9 340 aa25.99■■□□□ 1.75
SYNGR3-201ENST00000248121 BICDL2A1A5D9 508 aa25.98■■□□□ 1.75
SYNGR3-201ENST00000248121 MEIS1O00470 390 aa25.98■■□□□ 1.75
SYNGR3-201ENST00000248121 CYP2C8P10632 490 aa25.98■■□□□ 1.75
SYNGR3-201ENST00000248121 COASYQ13057 564 aa25.98■■□□□ 1.75
SYNGR3-201ENST00000248121 FASTKD5Q7L8L6 764 aaKnown RBP25.98■■□□□ 1.75
SYNGR3-201ENST00000248121 MXRA8Q9BRK3 442 aa25.98■■□□□ 1.75
SYNGR3-201ENST00000248121 PDCD2LQ9BRP1 358 aa25.98■■□□□ 1.75
SYNGR3-201ENST00000248121 DOCK5Q9H7D0 1870 aa25.98■■□□□ 1.75
SYNGR3-201ENST00000248121 NPHP3-ACAD11A0A0J9YXS1 232 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 PSMD10O75832 226 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 EEF1GP26641 437 aaKnown RBP25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 FKBP1BP68106 108 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 Q3C1V9 767 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 ARSHQ5FYA8 562 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 CHADLQ6NUI6 762 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 NYAP1Q6ZVC0 841 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 OTOP1Q7RTM1 612 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 ERMNQ8TAM6 284 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 SLC5A5Q92911 643 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 MAP3K20Q9NYL2 800 aaKnown RBP25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 PKD2L1Q9P0L9 805 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 RBPJLQ9UBG7 517 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 ASTN1O14525 1302 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 ITIH6Q6UXX5 1313 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 MYCLP12524 364 aaPredicted RBP25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 RBL2Q08999 1139 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 PCNX4Q63HM2 1172 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 GPBP1Q86WP2 473 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 GUF1Q8N442 669 aaKnown RBP25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 ANKRD20A12PQ8NF67 263 aa25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 NOC3LQ8WTT2 800 aaKnown RBP25.97■■□□□ 1.75
SYNGR3-201ENST00000248121 PSMD2Q13200 908 aa25.96■■□□□ 1.75
SYNGR3-201ENST00000248121 RIOX2Q8IUF8 465 aa25.96■■□□□ 1.75
SYNGR3-201ENST00000248121 BRI3BPQ8WY22 251 aa25.96■■□□□ 1.75
SYNGR3-201ENST00000248121 MOV10L1Q9BXT6 1211 aaKnown RBP25.96■■□□□ 1.75
SYNGR3-201ENST00000248121 PANK4Q9NVE7 773 aa25.96■■□□□ 1.75
SYNGR3-201ENST00000248121 NRDCO43847 1150 aa25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 CACNB1Q02641 598 aaPredicted RBP25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 CYP4A11Q02928 519 aa25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 ARHGEF16Q5VV41 709 aa25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 MB21D1Q8N884 522 aa25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 EIF2AK1Q9BQI3 630 aaKnown RBP25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 FGFBP2Q9BYJ0 223 aa25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 PCDHA2Q9Y5H9 948 aa25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 UBIAD1Q9Y5Z9 338 aa25.95■■□□□ 1.75
SYNGR3-201ENST00000248121 DCAF8L1A6NGE4 600 aa25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 GYPCP04921 128 aa25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 TNNT1P13805 278 aa25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 LRRC41Q15345 812 aa25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 TKFCQ3LXA3 575 aa25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 SAMD3Q8N6K7 520 aa25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 BAG1Q99933 345 aaPredicted RBP25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 POLR3CQ9BUI4 534 aaPredicted RBP25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 RGL1Q9NZL6 768 aa25.95■■□□□ 1.74
SYNGR3-201ENST00000248121 CCL15-CCL14A0A0B4J2E2 113 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 UNCXA6NJT0 531 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 BTBD19C9JJ37 291 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 NKRFO15226 690 aaKnown RBP eCLIP25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 CHMP2AO43633 222 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 CNTN2Q02246 1040 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 CCL15Q16663 113 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 LRCH2Q5VUJ6 765 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 NCAPG2Q86XI2 1143 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 ZNF507Q8TCN5 953 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 HSD17B14Q9BPX1 270 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 AKR1B15C9JRZ8 316 aaPredicted RBP25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 FSTL1Q12841 308 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 PABPC4Q13310 644 aaKnown RBP eCLIP25.94■■□□□ 1.741e-6■■□□□ 13.4
SYNGR3-201ENST00000248121 PPP2R5CQ13362 524 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 SPRYD7Q5W111 196 aa25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 SYT2Q8N9I0 419 aaPredicted RBP25.94■■□□□ 1.74
SYNGR3-201ENST00000248121 PPP1R13BQ96KQ4 1090 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms