RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TNKSO95271 1327 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 ZNF658Q5TYW1 1059 aaPredicted RBP14.9□□□□□ -0.02
TARDBP-201ENST00000240185 ANGPTL8Q6UXH0 198 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 EPM2AIP1Q7L775 607 aaPredicted RBP14.9□□□□□ -0.02
TARDBP-201ENST00000240185 SLC26A7Q8TE54 656 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 LARP4BQ92615 738 aaKnown RBP14.9□□□□□ -0.02
TARDBP-201ENST00000240185 ADPGKQ9BRR6 497 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 MLXIPLQ9NP71 852 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 MRPL40Q9NQ50 206 aaKnown RBP14.9□□□□□ -0.02
TARDBP-201ENST00000240185 KIAA1024Q9UPX6 916 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 RTCBQ9Y3I0 505 aaKnown RBP14.9□□□□□ -0.02
TARDBP-201ENST00000240185 USP17L12C9JPN9 530 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 USP17L21D6R901 530 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 PODXLO00592 558 aa14.9□□□□□ -0.02
TARDBP-201ENST00000240185 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.024e-10■□□□□ 10.1
TARDBP-201ENST00000240185 ELF1P32519 619 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 LRRC41Q15345 812 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 KLC3Q6P597 504 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 FAM96AQ9H5X1 160 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 SAYSD1Q9NPB0 183 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 COPG1Q9Y678 874 aaKnown RBP14.89□□□□□ -0.03
TARDBP-201ENST00000240185 CDK13Q14004 1512 aaKnown RBP14.89□□□□□ -0.03
TARDBP-201ENST00000240185 HABP4Q5JVS0 413 aaKnown RBP14.89□□□□□ -0.03
TARDBP-201ENST00000240185 GRAMD1CQ8IYS0 662 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 ZBTB18Q99592 522 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 ARPP21Q9UBL0 812 aaPredicted RBP14.89□□□□□ -0.03
TARDBP-201ENST00000240185 NOC2LQ9Y3T9 749 aaKnown RBP14.89□□□□□ -0.03
TARDBP-201ENST00000240185 MAST3O60307 1309 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 SLC4A1P02730 911 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 PYGLP06737 847 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 DNAJC24Q6P3W2 148 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 ACAD11Q709F0 780 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 SRLQ86TD4 932 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 SH3GL2Q99962 352 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 KIF9Q9HAQ2 790 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 HSPD1P10809 573 aaKnown RBP14.89□□□□□ -0.03
TARDBP-201ENST00000240185 ARL4AP40617 200 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 MRPL28Q13084 256 aaKnown RBP14.89□□□□□ -0.03
TARDBP-201ENST00000240185 CATSPER3Q86XQ3 398 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 KCTD6Q8NC69 237 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 PNMA1Q8ND90 353 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 CHCHD3Q9NX63 227 aaKnown RBP14.89□□□□□ -0.03
TARDBP-201ENST00000240185 ARHGAP26Q9UNA1 814 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 ATP11BQ9Y2G3 1177 aa14.89□□□□□ -0.03
TARDBP-201ENST00000240185 KITP10721 976 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 DDIT3P35638 169 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 NOP9Q86U38 636 aaKnown RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 TFCP2L1Q9NZI6 479 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 SOS2Q07890 1332 aaPredicted RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 KLRF2D3W0D1 207 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 CTIFO43310 598 aaKnown RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 ARFIP2P53365 341 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 KRT31Q15323 416 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 GSPT2Q8IYD1 628 aaKnown RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 OSBPL9Q96SU4 736 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 RWDD2AQ9UIY3 292 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 THRAP3Q9Y2W1 955 aaKnown RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 PTPN23Q9H3S7 1636 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 LRRIQ4A6NIV6 560 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 HNRNPDLO14979 420 aaKnown RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 SERPINB10P48595 397 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 PSMD7P51665 324 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 NR1H3Q13133 447 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 ARID5BQ14865 1188 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 CYTH1Q15438 398 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 RABGAP1LQ5R372 815 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 RARS2Q5T160 578 aaKnown RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 PPIP5K1Q6PFW1 1433 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 ENAHQ8N8S7 591 aaPredicted RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 ADA2Q9NZK5 511 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 FNDC3AQ9Y2H6 1198 aaKnown RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 MORC2Q9Y6X9 1032 aaPredicted RBP14.88□□□□□ -0.03
TARDBP-201ENST00000240185 KIF21AQ7Z4S6 1674 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 USP19O94966 1318 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 PI4K2BG5E9Z4 385 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 AP1B1Q10567 949 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 APOA5Q6Q788 366 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 CYP4F11Q9HBI6 524 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 H0Y626 953 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 SRGAP2O75044 1071 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 TRIM16O95361 564 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 RASSF3Q86WH2 238 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 IFNL3Q8IZI9 196 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 COG4Q9H9E3 785 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 SUGCTQ9HAC7 445 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 TBC1D23Q9NUY8 699 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 GCNT4Q9P109 453 aa14.88□□□□□ -0.03
TARDBP-201ENST00000240185 STXBP3O00186 592 aa14.87□□□□□ -0.03
TARDBP-201ENST00000240185 ATP1A3P13637 1013 aa14.87□□□□□ -0.03
TARDBP-201ENST00000240185 CAPRIN1Q14444 709 aaKnown RBP14.87□□□□□ -0.03
TARDBP-201ENST00000240185 TAF1BQ53T94 588 aaPredicted RBP14.87□□□□□ -0.03
TARDBP-201ENST00000240185 PARD3BQ8TEW8 1205 aa14.87□□□□□ -0.03
TARDBP-201ENST00000240185 EXT2Q93063 718 aa14.87□□□□□ -0.03
TARDBP-201ENST00000240185 HOOK2Q96ED9 719 aa14.87□□□□□ -0.03
TARDBP-201ENST00000240185 RBM17Q96I25 401 aaKnown RBP14.87□□□□□ -0.03
TARDBP-201ENST00000240185 TGS1Q96RS0 853 aaKnown RBP14.87□□□□□ -0.03
TARDBP-201ENST00000240185 ADAMTS1Q9UHI8 967 aa14.87□□□□□ -0.03
TARDBP-201ENST00000240185 PARP3Q9Y6F1 533 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms