RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 NLRX1Q86UT6 975 aa16.97■□□□□ 0.31
HDHD3-201ENST00000238379 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
HDHD3-201ENST00000238379 KIAA0895Q8NCT3 520 aa16.97■□□□□ 0.31
HDHD3-201ENST00000238379 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
HDHD3-201ENST00000238379 XPO4Q9C0E2 1151 aaKnown RBP16.97■□□□□ 0.31
HDHD3-201ENST00000238379 WRAP73Q9P2S5 460 aaPredicted RBP16.97■□□□□ 0.31
HDHD3-201ENST00000238379 PNMA3Q9UL41 463 aa16.97■□□□□ 0.31
HDHD3-201ENST00000238379 CCL15-CCL14A0A0B4J2E2 113 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 STAM2O75886 525 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 EYA4O95677 639 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 CYP2C8P10632 490 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 COPB2P35606 906 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 CCL15Q16663 113 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 CDKAL1Q5VV42 579 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 SPRYD7Q5W111 196 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 BRI3BPQ8WY22 251 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 SLC45A1Q9Y2W3 748 aa16.96■□□□□ 0.31
HDHD3-201ENST00000238379 BTBD19C9JJ37 291 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 PDHXO00330 501 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 PSMA7O14818 248 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 COBLO75128 1261 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.3
HDHD3-201ENST00000238379 PSMD2Q13200 908 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 STIM1Q13586 685 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 HSP90AA4PQ58FG1 418 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 CHADLQ6NUI6 762 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 MIER3Q7Z3K6 550 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 FAM133AQ8N9E0 248 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 NEK9Q8TD19 979 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 DHTKD1Q96HY7 919 aaPredicted RBP16.96■□□□□ 0.3
HDHD3-201ENST00000238379 BHMT2Q9H2M3 363 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 SLC39A2Q9NP94 309 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 PANK4Q9NVE7 773 aa16.96■□□□□ 0.3
HDHD3-201ENST00000238379 NPHP3-ACAD11A0A0J9YXS1 232 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 SOWAHBA6NEL2 793 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 POTEB2H3BUK9 544 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 ZBTB48P10074 688 aaPredicted RBP16.95■□□□□ 0.3
HDHD3-201ENST00000238379 PPP1R2P41236 205 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 ALDH5A1P51649 535 aaPredicted RBP16.95■□□□□ 0.3
HDHD3-201ENST00000238379 PMS1P54277 932 aaKnown RBP16.95■□□□□ 0.3
HDHD3-201ENST00000238379 FSTL1Q12841 308 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 ANKRD23Q86SG2 305 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 PIGOQ8TEQ8 1089 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 LXNQ9BS40 222 aa16.95■□□□□ 0.3
HDHD3-201ENST00000238379 FRMD3A2A2Y4 597 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 SPATA31C2B4DYI2 1134 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 ZBTB39O15060 712 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 EIF3JO75822 258 aaKnown RBP16.94■□□□□ 0.3
HDHD3-201ENST00000238379 CCNE2O96020 404 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 SERPINC1P01008 464 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 KCNA2P16389 499 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 EDNRBP24530 442 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 UBASH3AP57075 661 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 ERVK-9P63128 1117 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 ERVK-24P63145 666 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 COASYQ13057 564 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 GIT2Q14161 759 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 STXBP2Q15833 593 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 CCDC65Q8IXS2 484 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 GTF3C2Q8WUA4 911 aaPredicted RBP16.94■□□□□ 0.3
HDHD3-201ENST00000238379 NAP1L5Q96NT1 182 aaPredicted RBP16.94■□□□□ 0.3
HDHD3-201ENST00000238379 NACC1Q96RE7 527 aa16.94■□□□□ 0.3
HDHD3-201ENST00000238379 GOLGA6L6A8MZA4 724 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 P4HBP07237 508 aaKnown RBP16.93■□□□□ 0.3
HDHD3-201ENST00000238379 CDK11BP21127 795 aaKnown RBP16.93■□□□□ 0.3
HDHD3-201ENST00000238379 KRT76Q01546 638 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
HDHD3-201ENST00000238379 TTI2Q6NXR4 508 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 BANK1Q8NDB2 785 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 CDHR1Q96JP9 859 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 MROH8Q9H579 483 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 ADD3Q9UEY8 706 aaKnown RBP16.93■□□□□ 0.3
HDHD3-201ENST00000238379 NRBP1Q9UHY1 535 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 TRIM49BA6NDI0 452 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 CCNE1P24864 410 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 JAK3P52333 1124 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 RAD51AP2Q09MP3 1159 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 GNPTABQ3T906 1256 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 RINT1Q6NUQ1 792 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 APTXQ7Z2E3 356 aaKnown RBP16.93■□□□□ 0.3
HDHD3-201ENST00000238379 GUF1Q8N442 669 aaKnown RBP16.93■□□□□ 0.3
HDHD3-201ENST00000238379 SHCBP1Q8NEM2 672 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
HDHD3-201ENST00000238379 P2RX5Q93086 422 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 SENP7Q9BQF6 1050 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 RUSC1Q9BVN2 902 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 SAMM50Q9Y512 469 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 PCDHA2Q9Y5H9 948 aa16.93■□□□□ 0.3
HDHD3-201ENST00000238379 NFASCO94856 1347 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 WDR64B1ANS9 1081 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 CBFA2T2O43439 604 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 LYPLA2O95372 231 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 KRT18P05783 430 aaKnown RBP16.92■□□□□ 0.3
HDHD3-201ENST00000238379 SFNP31947 248 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 ICAM3P32942 547 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 TPD52L1Q16890 204 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms