RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 METTL7BQ6UX53 244 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 MYLIPQ8WY64 445 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 PGBD1Q96JS3 809 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 AIFM3Q96NN9 605 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 SDF4Q9BRK5 362 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 MTG1Q9BT17 334 aaPredicted RBP12.82□□□□□ -0.36
SF3B6-201ENST00000233468 TCEAL9Q9UHQ7 104 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 KCNJ14Q9UNX9 436 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
SF3B6-201ENST00000233468 SPTBN5Q9NRC6 3674 aaKnown RBP12.81□□□□□ -0.36
SF3B6-201ENST00000233468 A0A0U1RQG5 324 aaPredicted RBP12.81□□□□□ -0.36
SF3B6-201ENST00000233468 MEIS1O00470 390 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 MMP1P03956 469 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 MYL3P08590 195 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 ITGB5P18084 799 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 CIITAP33076 1130 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 BEX3Q00994 111 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 FAAP100Q0VG06 881 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
SF3B6-201ENST00000233468 MYSM1Q5VVJ2 828 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 RASGRP4Q8TDF6 673 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 TBCKQ8TEA7 893 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 AFG1LQ8WV93 481 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 COPS5Q92905 334 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 KATNAL1Q9BW62 490 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 KCNH7Q9NS40 1196 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 SMC3Q9UQE7 1217 aa12.81□□□□□ -0.36
SF3B6-201ENST00000233468 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
SF3B6-201ENST00000233468 CTAGE5O15320 804 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 MMP3P08254 477 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 ST3GAL1Q11201 340 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 KRT40Q6A162 431 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 MOXD1Q6UVY6 613 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 CYFIP1Q7L576 1253 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 PLA2G4DQ86XP0 818 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
SF3B6-201ENST00000233468 TBC1D22BQ9NU19 505 aa12.8□□□□□ -0.36
SF3B6-201ENST00000233468 CHD7Q9P2D1 2997 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 GBF1Q92538 1859 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 DCDC2CA8MYV0 355 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 M0R2N6 131 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 ARVCFO00192 962 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 KIAA0355O15063 1070 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 RAG1P15918 1043 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 GCFC2P16383 781 aaKnown RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 SMAD3P84022 425 aaKnown RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 PURAQ00577 322 aaKnown RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 SP2Q02086 613 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 NEK8Q86SG6 692 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 HSCBQ8IWL3 235 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 FBXO18Q8NFZ0 1043 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 CRYGNQ8WXF5 182 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 TNPO1Q92973 898 aaKnown RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 SNX21Q969T3 373 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 RNPC3Q96LT9 517 aaKnown RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 TOX2Q96NM4 488 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 ZNF577Q9BSK1 485 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 JPH1Q9HDC5 661 aaPredicted RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 TMEM39AQ9NV64 488 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 ZNF215Q9UL58 517 aaPredicted RBP12.79□□□□□ -0.36
SF3B6-201ENST00000233468 NFASCO94856 1347 aa12.79□□□□□ -0.36
SF3B6-201ENST00000233468 LCTP09848 1927 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 CYP3A7-CYP3A51PA0A087WV96 503 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 FAM86B1E9PN63 330 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 H3BQV1 296 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 K7ELQ4 463 aaPredicted RBP12.78□□□□□ -0.36
SF3B6-201ENST00000233468 PPP1R37O75864 691 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 CD2BP2O95400 341 aaKnown RBP12.78□□□□□ -0.36
SF3B6-201ENST00000233468 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 SUPT20HL2P0C7V6 817 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 HOXD8P13378 290 aaPredicted RBP12.78□□□□□ -0.36
SF3B6-201ENST00000233468 KCNA2P16389 499 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 PDCP20941 246 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 PTGS1P23219 599 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 CYP3A7P24462 503 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 PTPN11Q06124 597 aaPredicted RBP12.78□□□□□ -0.36
SF3B6-201ENST00000233468 SEMA3FQ13275 785 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 ITGA7Q13683 1181 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 NPY5RQ15761 445 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 Q4G0T1 1027 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 PRR16Q569H4 304 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 ANKRD33Q7Z3H0 272 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 INTS4Q96HW7 963 aaKnown RBP12.78□□□□□ -0.36
SF3B6-201ENST00000233468 FOXP1Q9H334 677 aaPredicted RBP12.78□□□□□ -0.36
SF3B6-201ENST00000233468 AGO4Q9HCK5 861 aaKnown RBP12.78□□□□□ -0.36
SF3B6-201ENST00000233468 SLC9A2Q9UBY0 812 aa12.78□□□□□ -0.36
SF3B6-201ENST00000233468 IPO5O00410 1097 aaKnown RBP12.77□□□□□ -0.37
SF3B6-201ENST00000233468 MARCH6O60337 910 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 ARP10275 920 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 GJB2P29033 226 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 FPGSQ05932 587 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 CUL4AQ13619 759 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 INF2Q27J81 1249 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms