RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 PAF1Q8N7H5 531 aa18.31■□□□□ 0.52
PTK7-202ENST00000230419 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
PTK7-202ENST00000230419 DDTLA6NHG4 134 aaPredicted RBP18.31■□□□□ 0.52
PTK7-202ENST00000230419 NDUFB10O96000 172 aa18.31■□□□□ 0.52
PTK7-202ENST00000230419 BCRP11274 1271 aa18.31■□□□□ 0.52
PTK7-202ENST00000230419 WDR44Q5JSH3 913 aa18.31■□□□□ 0.52
PTK7-202ENST00000230419 RETREG2Q8NC44 543 aa18.31■□□□□ 0.52
PTK7-202ENST00000230419 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
PTK7-202ENST00000230419 FOSP01100 380 aaPredicted RBP18.3■□□□□ 0.52
PTK7-202ENST00000230419 RXRBP28702 533 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 MICALCLQ6ZW33 695 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 MGARPQ8TDB4 240 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 NUCKS1Q9H1E3 243 aaKnown RBP18.3■□□□□ 0.52
PTK7-202ENST00000230419 GPR75-ASB3A0A0A6YYF3 556 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 CD19P15391 556 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 CTNNA1P35221 906 aaKnown RBP18.3■□□□□ 0.52
PTK7-202ENST00000230419 DDR1Q08345 913 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 C16orf86Q6ZW13 317 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 GLIS3Q8NEA6 775 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 HOOK2Q96ED9 719 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 IFT74Q96LB3 600 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 MTUS1Q9ULD2 1270 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 NALCNQ8IZF0 1738 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 VIMP08670 466 aaKnown RBP18.3■□□□□ 0.52
PTK7-202ENST00000230419 TRIM49P0CI25 452 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 TRIM49CP0CI26 452 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 KCNH2Q12809 1159 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 TMED8Q6PL24 325 aaPredicted RBP18.3■□□□□ 0.52
PTK7-202ENST00000230419 CYP2W1Q8TAV3 490 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 BCAS4Q8TDM0 211 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 ACER1Q8TDN7 264 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 CHORDC1Q9UHD1 332 aaPredicted RBP18.3■□□□□ 0.52
PTK7-202ENST00000230419 PTPN22Q9Y2R2 807 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 ABCB11O95342 1321 aa18.3■□□□□ 0.52
PTK7-202ENST00000230419 MYL1P05976 194 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 POLD1P28340 1107 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 SP8Q8IXZ3 490 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 NOA1Q8NC60 698 aaKnown RBP18.29■□□□□ 0.52
PTK7-202ENST00000230419 BUB1BO60566 1050 aaPredicted RBP18.29■□□□□ 0.52
PTK7-202ENST00000230419 NMT1P30419 496 aaKnown RBP18.29■□□□□ 0.52
PTK7-202ENST00000230419 ALKBH5Q6P6C2 394 aaKnown RBP18.29■□□□□ 0.52
PTK7-202ENST00000230419 ANKRD7Q92527 254 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 TMEM39BQ9GZU3 492 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 DHX36Q9H2U1 1008 aaKnown RBP18.29■□□□□ 0.52
PTK7-202ENST00000230419 MTRF1LQ9UGC7 380 aaKnown RBP18.29■□□□□ 0.52
PTK7-202ENST00000230419 PALMO75781 387 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 SLC10A5Q5PT55 438 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 DYDC2Q96IM9 177 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 PRMT6Q96LA8 375 aaPredicted RBP18.29■□□□□ 0.52
PTK7-202ENST00000230419 ANKFY1Q9P2R3 1169 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.29■□□□□ 0.52
PTK7-202ENST00000230419 JRKLQ9Y4A0 524 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 CNTNAP4Q9C0A0 1308 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 KRT19P08727 400 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 IRX5P78411 483 aaPredicted RBP18.29■□□□□ 0.52
PTK7-202ENST00000230419 DEFB132Q7Z7B7 95 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 RPGRIP1Q96KN7 1286 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 NFU1Q9UMS0 254 aa18.29■□□□□ 0.52
PTK7-202ENST00000230419 ABL1P00519 1130 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 SSTR3P32745 418 aaPredicted RBP18.28■□□□□ 0.52
PTK7-202ENST00000230419 LRRC63Q05C16 580 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 PODNQ7Z5L7 613 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 RIN2Q8WYP3 895 aaPredicted RBP18.28■□□□□ 0.52
PTK7-202ENST00000230419 MMS19Q96T76 1030 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 CCSER1Q9C0I3 900 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 INTS13Q9NVM9 706 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 CTIFO43310 598 aaKnown RBP18.28■□□□□ 0.52
PTK7-202ENST00000230419 ADCY1Q08828 1119 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 CCDC170Q8IYT3 715 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 POMGNT1Q8WZA1 660 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 ADAM21Q9UKJ8 722 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 DCCP43146 1447 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 LRRIQ4A6NIV6 560 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 E7EVH7 732 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 ZNF746Q6NUN9 644 aaPredicted RBP18.28■□□□□ 0.52
PTK7-202ENST00000230419 TMEM179Q6ZVK1 233 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 SPZ1Q9BXG8 430 aa18.28■□□□□ 0.52
PTK7-202ENST00000230419 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
PTK7-202ENST00000230419 VGLL3A8MV65 326 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 HNRNPDLO14979 420 aaKnown RBP18.27■□□□□ 0.52
PTK7-202ENST00000230419 CCT5P48643 541 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 MKRN3Q13064 507 aaKnown RBP18.27■□□□□ 0.52
PTK7-202ENST00000230419 SUPT20HQ8NEM7 779 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 LIMA1Q9UHB6 759 aaKnown RBP18.27■□□□□ 0.52
PTK7-202ENST00000230419 PALM3A6NDB9 673 aaPredicted RBP18.27■□□□□ 0.52
PTK7-202ENST00000230419 ERVK-24P63145 666 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 MYL7Q01449 175 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 STRN3Q13033 797 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 PPFIA1Q13136 1202 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 GLG1Q92896 1179 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 PARVGQ9HBI0 331 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 METTL14Q9HCE5 456 aaKnown RBP18.27■□□□□ 0.52
PTK7-202ENST00000230419 FZD1Q9UP38 647 aa18.27■□□□□ 0.52
PTK7-202ENST00000230419 IFNB1P01574 187 aa18.27■□□□□ 0.51
PTK7-202ENST00000230419 UAP1Q16222 522 aaPredicted RBP18.27■□□□□ 0.51
PTK7-202ENST00000230419 IL17AQ16552 155 aa18.27■□□□□ 0.51
PTK7-202ENST00000230419 ZC2HC1CQ53FD0 456 aaPredicted RBP18.27■□□□□ 0.51
PTK7-202ENST00000230419 UBL4BQ8N7F7 174 aa18.27■□□□□ 0.51
PTK7-202ENST00000230419 ELMO3Q96BJ8 720 aa18.27■□□□□ 0.51
PTK7-202ENST00000230419 TMOD4Q9NZQ9 345 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms