RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 SLKQ9H2G2 1235 aaPredicted RBP20.59■□□□□ 0.89
PFN1-201ENST00000225655 RNPEPQ9H4A4 650 aa20.59■□□□□ 0.89
PFN1-201ENST00000225655 ZNF215Q9UL58 517 aaPredicted RBP20.59■□□□□ 0.89
PFN1-201ENST00000225655 CHD7Q9P2D1 2997 aa20.59■□□□□ 0.89
PFN1-201ENST00000225655 CAND2O75155 1236 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 KCNA2P16389 499 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 PDIA3P30101 505 aaKnown RBP20.58■□□□□ 0.89
PFN1-201ENST00000225655 THPOP40225 353 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 TAP1Q03518 808 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 IKBKEQ14164 716 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 UBE2SQ16763 222 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 TCTN1Q2MV58 587 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 TRIM50Q86XT4 487 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 PPM1EQ8WY54 764 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 ZSCAN31Q96LW9 406 aaPredicted RBP20.58■□□□□ 0.89
PFN1-201ENST00000225655 LIMCH1Q9UPQ0 1083 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 TELO2Q9Y4R8 837 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 UBIAD1Q9Y5Z9 338 aa20.58■□□□□ 0.89
PFN1-201ENST00000225655 NID2Q14112 1375 aa20.58■□□□□ 0.88
PFN1-201ENST00000225655 RSPH10B2B2RC85 870 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 TREHO43280 583 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 TLL1O43897 1013 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 LGR5O75473 907 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 CDKL5O76039 1030 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 RSPH10BP0C881 870 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 GNAT1P11488 350 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 FUT2Q10981 343 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 MTMR1Q13613 665 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 WWC2Q6AWC2 1192 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 SYMPKQ92797 1274 aaKnown RBP20.57■□□□□ 0.88
PFN1-201ENST00000225655 PCDHA6Q9UN73 950 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 PCDHA8Q9Y5H6 950 aa20.57■□□□□ 0.88
PFN1-201ENST00000225655 hCG_1984214I3L0E3 225 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 ATP9AO75110 1047 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 POU3F3P20264 500 aaPredicted RBP20.56■□□□□ 0.88
PFN1-201ENST00000225655 DEFB103AP81534 67 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 AKAP17AQ02040 695 aaKnown RBP20.56■□□□□ 0.88
PFN1-201ENST00000225655 SP4Q02446 784 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 PPP1R18Q6NYC8 613 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 ZNF713Q8N859 430 aaPredicted RBP20.56■□□□□ 0.88
PFN1-201ENST00000225655 EHMT1Q9H9B1 1298 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 PRDM6Q9NQX0 595 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 SH2B1Q9NRF2 756 aaPredicted RBP20.56■□□□□ 0.88
PFN1-201ENST00000225655 SETD4Q9NVD3 440 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 TPCN1Q9ULQ1 816 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 KAT6AQ92794 2004 aa20.56■□□□□ 0.88
PFN1-201ENST00000225655 MAFGO15525 162 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 ARHGEF15O94989 841 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 TCF7P36402 384 aaPredicted RBP20.55■□□□□ 0.88
PFN1-201ENST00000225655 CCT2P78371 535 aaKnown RBP20.55■□□□□ 0.88
PFN1-201ENST00000225655 ADAM17P78536 824 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 STK3Q13188 491 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 CCDC85BQ15834 202 aaPredicted RBP20.55■□□□□ 0.88
PFN1-201ENST00000225655 TJAP1Q5JTD0 557 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 UTP14CQ5TAP6 766 aaKnown RBP20.55■□□□□ 0.88
PFN1-201ENST00000225655 TMCO2Q7Z6W1 182 aaPredicted RBP20.55■□□□□ 0.88
PFN1-201ENST00000225655 ATXN2LQ8WWM7 1075 aaKnown RBP20.55■□□□□ 0.88
PFN1-201ENST00000225655 LARP6Q9BRS8 491 aaKnown RBP20.55■□□□□ 0.88
PFN1-201ENST00000225655 ZBED2Q9BTP6 218 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 CERS4Q9HA82 394 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 RIC8AQ9NPQ8 531 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 JADE2Q9NQC1 790 aa20.55■□□□□ 0.88
PFN1-201ENST00000225655 V9GY48 417 aaPredicted RBP20.55■□□□□ 0.88
PFN1-201ENST00000225655 MICAL3Q7RTP6 2002 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 EPOPA6NHQ4 379 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 PFKFB2O60825 505 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 GJB5O95377 273 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 NAPAP54920 295 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 MKRN4PQ13434 485 aaPredicted RBP20.54■□□□□ 0.88
PFN1-201ENST00000225655 TYW1BQ6NUM6 668 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 TRIM22Q8IYM9 498 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 LMBR1Q8WVP7 490 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 ARNTL2Q8WYA1 636 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 SEPT1Q8WYJ6 367 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 FAM217BQ9NTX9 383 aaPredicted RBP20.54■□□□□ 0.88
PFN1-201ENST00000225655 THEGQ9P2T0 379 aa20.54■□□□□ 0.88
PFN1-201ENST00000225655 NRCAMQ92823 1304 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 GSTTP1A0A1W2PQM5 241 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 RFXAPO00287 272 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 FOSP01100 380 aaPredicted RBP20.53■□□□□ 0.88
PFN1-201ENST00000225655 ADCY7P51828 1080 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 ARHGAP4P98171 946 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 PLEKHG4Q58EX7 1191 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 RAD9AQ99638 391 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 BARHL2Q9NY43 387 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 TRANK1O15050 2925 aa20.53■□□□□ 0.88
PFN1-201ENST00000225655 VCANP13611 3396 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 PRRC2BQ5JSZ5 2229 aaKnown RBP20.52■□□□□ 0.88
PFN1-201ENST00000225655 LCHNA4D1U4 455 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 STXBP3O00186 592 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 GTPBP6O43824 516 aaPredicted RBP20.52■□□□□ 0.88
PFN1-201ENST00000225655 CDC27P30260 824 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 DBF4BQ8NFT6 615 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 GLT8D2Q9H1C3 349 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 TSPYL2Q9H2G4 693 aaPredicted RBP20.52■□□□□ 0.88
PFN1-201ENST00000225655 ERAP1Q9NZ08 941 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 MTCH2Q9Y6C9 303 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 TTC28Q96AY4 2481 aa20.52■□□□□ 0.88
PFN1-201ENST00000225655 COL4A4P53420 1690 aaPredicted RBP20.51■□□□□ 0.87
PFN1-201ENST00000225655 CTSHP09668 335 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms