RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ERMNQ8TAM6 284 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 FAM71BQ8TC56 605 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 TSGA10Q9BZW7 698 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 ACBD3Q9H3P7 528 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 PLAGL2Q9UPG8 496 aa24.54■■□□□ 1.52
CCDC9-201ENST00000221922 SSBP05455 408 aaKnown RBP eCLIP24.53■■□□□ 1.52
CCDC9-201ENST00000221922 ECE1P42892 770 aa24.53■■□□□ 1.52
CCDC9-201ENST00000221922 USH1GQ495M9 461 aa24.53■■□□□ 1.52
CCDC9-201ENST00000221922 ZBED3Q96IU2 234 aaPredicted RBP24.53■■□□□ 1.52
CCDC9-201ENST00000221922 P2RX7Q99572 595 aaKnown RBP24.53■■□□□ 1.52
CCDC9-201ENST00000221922 MED4Q9NPJ6 270 aa24.53■■□□□ 1.52
CCDC9-201ENST00000221922 SIK3Q9Y2K2 1263 aa24.53■■□□□ 1.52
CCDC9-201ENST00000221922 NKRFO15226 690 aaKnown RBP eCLIP24.52■■□□□ 1.52
CCDC9-201ENST00000221922 FKBP3Q00688 224 aaKnown RBP24.52■■□□□ 1.52
CCDC9-201ENST00000221922 VEZTQ9HBM0 779 aa24.52■■□□□ 1.52
CCDC9-201ENST00000221922 PIK3CDO00329 1044 aa24.52■■□□□ 1.52
CCDC9-201ENST00000221922 ZNF263O14978 683 aa24.52■■□□□ 1.52
CCDC9-201ENST00000221922 KIF5AQ12840 1032 aa24.52■■□□□ 1.52
CCDC9-201ENST00000221922 SPICE1Q8N0Z3 855 aa24.52■■□□□ 1.52
CCDC9-201ENST00000221922 ETNPPLQ8TBG4 499 aa24.52■■□□□ 1.52
CCDC9-201ENST00000221922 ACER1Q8TDN7 264 aa24.52■■□□□ 1.52
CCDC9-201ENST00000221922 DUSP10Q9Y6W6 482 aa24.52■■□□□ 1.52
CCDC9-201ENST00000221922 POTEB3A0JP26 581 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 POTECB2RU33 542 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 E9PMD0 336 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 TULP2O00295 520 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 OPLAHO14841 1288 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 LMAN1P49257 510 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 TGFB2P61812 414 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 CYP27A1Q02318 531 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 LRRC41Q15345 812 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 ZSCAN26Q16670 478 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 MAP9Q49MG5 647 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 ZCWPW2Q504Y3 356 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 POTEBQ6S5H4 581 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 GPBP1Q86WP2 473 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 GOLGA5Q8TBA6 731 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 CCDC42Q96M95 316 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 PIM2Q9P1W9 311 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 FAN1Q9Y2M0 1017 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 PITPNM2Q9BZ72 1349 aa24.51■■□□□ 1.51
CCDC9-201ENST00000221922 LCA5LO95447 670 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 AARSP49588 968 aaKnown RBP eCLIP24.5■■□□□ 1.51
CCDC9-201ENST00000221922 CXCL9Q07325 125 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 KIAA1755Q5JYT7 1200 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 SECISBP2LQ93073 1101 aaKnown RBP24.5■■□□□ 1.51
CCDC9-201ENST00000221922 FAM20AQ96MK3 541 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 CEP63Q96MT8 703 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 FER1L6Q2WGJ9 1857 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 GNA14O95837 355 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 CIITAP33076 1130 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 SPA17Q15506 151 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 PRR16Q569H4 304 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 HSP90B2PQ58FF3 399 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 EDEM3Q9BZQ6 932 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 TMEM39BQ9GZU3 492 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 COL4A3BPQ9Y5P4 624 aa24.5■■□□□ 1.51
CCDC9-201ENST00000221922 PLA2G6O60733 806 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 ARHGAP27Q6ZUM4 889 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 CAPZA3Q96KX2 299 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 SH2D4AQ9H788 454 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 PGAP2Q9UHJ9 254 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 PDE2AO00408 941 aaPredicted RBP24.49■■□□□ 1.51
CCDC9-201ENST00000221922 CYP11B2P19099 503 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 MAP3K10Q02779 954 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 SPIRE1Q08AE8 756 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 GLIS3Q8NEA6 775 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 LENG9Q96B70 501 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 ARHGAP20Q9P2F6 1191 aa24.49■■□□□ 1.51
CCDC9-201ENST00000221922 BRCA1P38398 1863 aaKnown RBP24.48■■□□□ 1.51
CCDC9-201ENST00000221922 FRMD3A2A2Y4 597 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 TRAF5O00463 557 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 MED24O75448 989 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 KRT18P05783 430 aaKnown RBP24.48■■□□□ 1.51
CCDC9-201ENST00000221922 CYP3A4P08684 503 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 ACTN2P35609 894 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 SLC12A3P55017 1021 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 FAM83BQ5T0W9 1011 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 TRIM58Q8NG06 486 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 CCDC102AQ96A19 550 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 VCPKMTQ9H867 229 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 MMRN2Q9H8L6 949 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 JRKLQ9Y4A0 524 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 PCDHA2Q9Y5H9 948 aa24.48■■□□□ 1.51
CCDC9-201ENST00000221922 MACROD2A1Z1Q3 448 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 USO1O60763 962 aaKnown RBP24.47■■□□□ 1.51
CCDC9-201ENST00000221922 PLEKP08567 350 aaPredicted RBP24.47■■□□□ 1.51
CCDC9-201ENST00000221922 CAP2P40123 477 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 STAT3P40763 770 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 HERC4Q5GLZ8 1057 aaPredicted RBP24.47■■□□□ 1.51
CCDC9-201ENST00000221922 PPP4R3CPQ6ZMV5 832 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 CHURC1Q8WUH1 139 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 PCDHA13Q9Y5I0 950 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 EPHB6O15197 1021 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 ZNF185O15231 689 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 PRLRP16471 622 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 RPA1P27694 616 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 CCDC40Q4G0X9 1142 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 CIAPIN1Q6FI81 312 aa24.47■■□□□ 1.51
CCDC9-201ENST00000221922 IQCEQ6IPM2 695 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms