RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 SYN2Q92777 582 aaPredicted RBP20.34■□□□□ 0.85
CACTIN-201ENST00000221899 JMJD4Q9H9V9 463 aa20.34■□□□□ 0.85
CACTIN-201ENST00000221899 PCDHGC5Q9Y5F6 944 aa20.34■□□□□ 0.85
CACTIN-201ENST00000221899 INPP5BP32019 993 aa20.33■□□□□ 0.85
CACTIN-201ENST00000221899 ADAM9Q13443 819 aa20.33■□□□□ 0.85
CACTIN-201ENST00000221899 FAM98CQ17RN3 349 aaKnown RBP20.33■□□□□ 0.85
CACTIN-201ENST00000221899 SCFD1Q8WVM8 642 aa20.33■□□□□ 0.85
CACTIN-201ENST00000221899 TNRC6CQ9HCJ0 1690 aaKnown RBP20.33■□□□□ 0.85
CACTIN-201ENST00000221899 ARHGEF1Q92888 912 aaKnown RBP20.33■□□□□ 0.84
CACTIN-201ENST00000221899 CDK5RAP2Q96SN8 1893 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 KRT18P05783 430 aaKnown RBP20.32■□□□□ 0.84
CACTIN-201ENST00000221899 PLA2G4BP0C869 781 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 NR1D1P20393 614 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 STAT3P40763 770 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 PTK2Q05397 1052 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 CDC37Q16543 378 aaPredicted RBP20.32■□□□□ 0.84
CACTIN-201ENST00000221899 USP38Q8NB14 1042 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 TAF4BQ92750 862 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 PLAAQ9Y263 795 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 hCG_1984214I3L0E3 225 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 SLC9A1P19634 815 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 HPDP32754 393 aaPredicted RBP20.32■□□□□ 0.84
CACTIN-201ENST00000221899 LSP1P33241 339 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 KCNH2Q12809 1159 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 CEP85LQ5SZL2 805 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 DDX42Q86XP3 938 aaKnown RBP eCLIP20.32■□□□□ 0.84
CACTIN-201ENST00000221899 CCDC65Q8IXS2 484 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 ZNF713Q8N859 430 aaPredicted RBP20.32■□□□□ 0.84
CACTIN-201ENST00000221899 IPO4Q8TEX9 1081 aaKnown RBP20.32■□□□□ 0.84
CACTIN-201ENST00000221899 CEP63Q96MT8 703 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 GANQ9H2C0 597 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 EMILIN3Q9NT22 766 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 PCDHA2Q9Y5H9 948 aa20.32■□□□□ 0.84
CACTIN-201ENST00000221899 FAM170AA1A519 330 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 RAD21O60216 631 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 SEC24CP53992 1094 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 ASPRV1Q53RT3 343 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 PPP4R3AQ6IN85 833 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 KDM7AQ6ZMT4 941 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 OR2W6PQ8NHA6 318 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 AP1M1Q9BXS5 423 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 CASP5P51878 434 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 RPS6KA1Q15418 735 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 KCTD1Q719H9 257 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 KCTD10Q9H3F6 313 aa20.31■□□□□ 0.84
CACTIN-201ENST00000221899 PNMA6FA0A0J9YX94 578 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L15C9J2P7 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L13C9JLJ4 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L11C9JVI0 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L18D6R9N7 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L22D6RA61 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L17D6RBQ6 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L19D6RCP7 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L20D6RJB6 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 CEP104O60308 925 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 ERVK-9P63128 1117 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 TNNC1P63316 161 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L24Q0WX57 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L6PQ6QN14 398 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 CUL5Q93034 780 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 RTCBQ9Y3I0 505 aaKnown RBP20.3■□□□□ 0.84
CACTIN-201ENST00000221899 USP17L10C9JJH3 530 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 F8W031 263 aaPredicted RBP20.3■□□□□ 0.84
CACTIN-201ENST00000221899 SLURP2P0DP57 97 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 NR2F2P24468 414 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 ZNF571Q7Z3V5 609 aaPredicted RBP20.3■□□□□ 0.84
CACTIN-201ENST00000221899 SPAG5Q96R06 1193 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 AIPL1Q9NZN9 384 aa20.3■□□□□ 0.84
CACTIN-201ENST00000221899 PLCG2P16885 1265 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 ATP6V1G3Q96LB4 118 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 POTEFA5A3E0 1075 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 GNA14O95837 355 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 POTEIP0CG38 1075 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 CYP11B2P19099 503 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 POTEGQ6S5H5 508 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 POTEEQ6S8J3 1075 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 WHAMMQ8TF30 809 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 NT5C3AQ9H0P0 336 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 PSTPIP2Q9H939 334 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 HDAC9Q9UKV0 1011 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 NOVP48745 357 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 CLK2P49760 499 aaKnown RBP20.29■□□□□ 0.84
CACTIN-201ENST00000221899 ZNF543Q08ER8 600 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 SEPT2Q15019 361 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 FAM182BQ5T319 152 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 NAA35Q5VZE5 725 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 MMS22LQ6ZRQ5 1243 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 ARHGAP27Q6ZUM4 889 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 MREGQ8N565 214 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 CAPN7Q9Y6W3 813 aa20.29■□□□□ 0.84
CACTIN-201ENST00000221899 TMCO5BA8MYB1 307 aa20.28■□□□□ 0.84
CACTIN-201ENST00000221899 MEIS1O00470 390 aa20.28■□□□□ 0.84
CACTIN-201ENST00000221899 MED24O75448 989 aa20.28■□□□□ 0.84
CACTIN-201ENST00000221899 KIF4AO95239 1232 aa20.28■□□□□ 0.84
CACTIN-201ENST00000221899 DCAF17Q5H9S7 520 aaPredicted RBP20.28■□□□□ 0.84
CACTIN-201ENST00000221899 TAF1DQ9H5J8 278 aaPredicted RBP20.28■□□□□ 0.84
CACTIN-201ENST00000221899 MYH7BA7E2Y1 1941 aa20.28■□□□□ 0.84
CACTIN-201ENST00000221899 CETN3O15182 167 aa20.28■□□□□ 0.84
CACTIN-201ENST00000221899 KIAA0754O94854 1291 aa20.28■□□□□ 0.84
CACTIN-201ENST00000221899 EPN3Q9H201 632 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms