RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 PCDHA1Q9Y5I3 950 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 CHD4Q14839 1912 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 MYH3P11055 1940 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 TLDC2A0PJX2 215 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 BACH1O14867 736 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 RAD51CO43502 376 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 GCNT3O95395 438 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 NR1D1P20393 614 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 CTNNA1P35221 906 aaKnown RBP12.26□□□□□ -0.45
NEFM-201ENST00000221166 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
NEFM-201ENST00000221166 SEC24CP53992 1094 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 PPP4CP60510 307 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 EXOC3L4Q17RC7 722 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 LRRC55Q6ZSA7 311 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 MTMR9Q96QG7 549 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 MTMR4Q9NYA4 1195 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 PNMA6FA0A0J9YX94 578 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 SSU72P8A0A1W2PR75 194 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 CHMP2AO43633 222 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 B4GALNT4Q76KP1 1039 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 CASKIN2Q8WXE0 1202 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 DDX47Q9H0S4 455 aaKnown RBP12.26□□□□□ -0.45
NEFM-201ENST00000221166 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.45
NEFM-201ENST00000221166 DNM3Q9UQ16 869 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 DISP2A7MBM2 1401 aa12.26□□□□□ -0.45
NEFM-201ENST00000221166 ECM29Q5VYK3 1845 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 CICQ96RK0 1608 aaPredicted RBP12.25□□□□□ -0.45
NEFM-201ENST00000221166 XRCC5P13010 732 aaKnown RBP12.25□□□□□ -0.45
NEFM-201ENST00000221166 PRLRP16471 622 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 PDIA5Q14554 519 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 IFI16Q16666 785 aaKnown RBP12.25□□□□□ -0.45
NEFM-201ENST00000221166 DOK7Q18PE1 504 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 RNPC3Q96LT9 517 aaKnown RBP12.25□□□□□ -0.45
NEFM-201ENST00000221166 JMJD4Q9H9V9 463 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
NEFM-201ENST00000221166 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
NEFM-201ENST00000221166 GNA14O95837 355 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 TTLL1O95922 423 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 HLA-DOAP06340 250 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 MYZAPP0CAP1 466 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 USP8P40818 1118 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 IFT88Q13099 833 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 SLC18A3Q16572 532 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 ALKBH5Q6P6C2 394 aaKnown RBP12.25□□□□□ -0.45
NEFM-201ENST00000221166 MICALCLQ6ZW33 695 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 RDH13Q8NBN7 331 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 TOGARAM1Q9Y4F4 1720 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 TMEM110-MUSTN1A8MSY1 372 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 CLSTN1O94985 981 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 NAB2Q15742 525 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 PROM2Q8N271 834 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 ERMNQ8TAM6 284 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 MXD3Q9BW11 206 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 CCDC113Q9H0I3 377 aa12.25□□□□□ -0.45
NEFM-201ENST00000221166 TMX4Q9H1E5 349 aaPredicted RBP12.25□□□□□ -0.45
NEFM-201ENST00000221166 MYH13Q9UKX3 1938 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 GOLGA6L7A0A1B0GV03 622 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 TLR2O60603 784 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 HNRNPH3P31942 346 aaKnown RBP12.24□□□□□ -0.45
NEFM-201ENST00000221166 CACNB3P54284 484 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 GLE1Q53GS7 698 aaKnown RBP12.24□□□□□ -0.45
NEFM-201ENST00000221166 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 EFCC1Q9HA90 598 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 GFPT2O94808 682 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 PTK2Q05397 1052 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 ICE2Q659A1 982 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 SERPINB13Q9UIV8 391 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 THRAP3Q9Y2W1 955 aaKnown RBP12.24□□□□□ -0.45
NEFM-201ENST00000221166 MYH10P35580 1976 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 SPDYE3A6NKU9 549 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 FLOT1O75955 427 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 SLC20A2Q08357 652 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 GJB7Q6PEY0 223 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 SFR1Q86XK3 245 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 RNF14Q9UBS8 474 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 KDM3AQ9Y4C1 1321 aa12.24□□□□□ -0.45
NEFM-201ENST00000221166 GPR75-ASB3A0A0A6YYF3 556 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 H2AFZP0C0S5 128 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 EPB41P11171 864 aaKnown RBP12.23□□□□□ -0.45
NEFM-201ENST00000221166 ARHGAP44Q17R89 818 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 H2AFVQ71UI9 128 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 UHMK1Q8TAS1 419 aaKnown RBP12.23□□□□□ -0.45
NEFM-201ENST00000221166 ZC3H12CQ9C0D7 883 aaKnown RBP12.23□□□□□ -0.45
NEFM-201ENST00000221166 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 TAF1P21675 1872 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 AFPP02771 609 aaKnown RBP12.23□□□□□ -0.45
NEFM-201ENST00000221166 ATP2B4P23634 1241 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 KRT71Q3SY84 523 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 HGSNATQ68CP4 663 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 PPP1R12BO60237 982 aaPredicted RBP12.23□□□□□ -0.45
NEFM-201ENST00000221166 KRT13P13646 458 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 MAEAQ7L5Y9 396 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 CEP63Q96MT8 703 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 AMACRQ9UHK6 382 aa12.23□□□□□ -0.45
NEFM-201ENST00000221166 ZC3H4Q9UPT8 1303 aaKnown RBP12.23□□□□□ -0.45
NEFM-201ENST00000221166 FAM13AO94988 1023 aa12.22□□□□□ -0.45
NEFM-201ENST00000221166 TM4SF1P30408 202 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms