RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 NKX2-3Q8TAU0 364 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 BPIFA3Q9BQP9 254 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 SYNPO2Q9UMS6 1093 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 B4DLN1 442 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 NPR1P16066 1061 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 MCM3P25205 808 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 UBXN2AP68543 259 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 KBTBD12Q3ZCT8 623 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 C12orf60Q5U649 245 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 GPBP1Q86WP2 473 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 TPH2Q8IWU9 490 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 RNF168Q8IYW5 571 aaPredicted RBP11.55□□□□□ -0.56
VPS18-201ENST00000220509 CSRNP1Q96S65 589 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 CHP1Q99653 195 aa11.55□□□□□ -0.56
VPS18-201ENST00000220509 DUSP9Q99956 384 aaKnown RBP11.55□□□□□ -0.56
VPS18-201ENST00000220509 HGSO14964 777 aaPredicted RBP11.54□□□□□ -0.56
VPS18-201ENST00000220509 PPP1R2P41236 205 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 KCNJ6P48051 423 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 ABCB5Q2M3G0 1257 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 FLAD1Q8NFF5 587 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 MMS19Q96T76 1030 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 PSD3Q9NYI0 1048 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
VPS18-201ENST00000220509 KIAA1024Q9UPX6 916 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 BCS1LQ9Y276 419 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 ZSCAN9O15535 394 aaPredicted RBP11.54□□□□□ -0.56
VPS18-201ENST00000220509 MYCLP1P12525 358 aaPredicted RBP11.54□□□□□ -0.56
VPS18-201ENST00000220509 RAB27AP51159 221 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 CKAP4Q07065 602 aaKnown RBP11.54□□□□□ -0.56
VPS18-201ENST00000220509 KCTD19Q17RG1 926 aaPredicted RBP11.54□□□□□ -0.56
VPS18-201ENST00000220509 THEMIS2Q5TEJ8 643 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 SDCCAG8Q86SQ7 713 aaPredicted RBP11.54□□□□□ -0.56
VPS18-201ENST00000220509 MIPOL1Q8TD10 442 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 TBC1D5Q92609 795 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 TUBGCP2Q9BSJ2 902 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 AGXT2Q9BYV1 514 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 TRIM7Q9C029 511 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 KCNQ5Q9NR82 932 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 SMARCAL1Q9NZC9 954 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 EPN1Q9Y6I3 576 aaPredicted RBP11.54□□□□□ -0.56
VPS18-201ENST00000220509 KRT13P13646 458 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 CYP11B2P19099 503 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 ASPRV1Q53RT3 343 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 FBXO11Q86XK2 927 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 RDH13Q8NBN7 331 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 SELENOOQ9BVL4 669 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 YIPF3Q9GZM5 350 aa11.54□□□□□ -0.56
VPS18-201ENST00000220509 TRIM49BA6NDI0 452 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 FOXP2O15409 715 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 GCNT3O95395 438 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 MYCLP12524 364 aaPredicted RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 MAGEA1P43355 309 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 COA1Q9GZY4 146 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 GLT8D2Q9H1C3 349 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 CD248Q9HCU0 757 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 TMEM260Q9NX78 707 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 PCDHB13Q9Y5F0 798 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 MAP2K7O14733 419 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 ORC4O43929 436 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 ATP1A1P05023 1023 aaKnown RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 GPATCH4Q5T3I0 446 aaKnown RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 MYOCDQ8IZQ8 938 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 PROM2Q8N271 834 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 NAP1L4Q99733 375 aaKnown RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 TPX2Q9ULW0 747 aaKnown RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 ARFGEF2Q9Y6D5 1785 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 E7EVH7 732 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 MFAP3LO75121 409 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 DNM2P50570 870 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 SFMBT2Q5VUG0 894 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 MYCT1Q8N699 235 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 DYDC1Q8WWB3 177 aa11.53□□□□□ -0.56
VPS18-201ENST00000220509 LARP4BQ92615 738 aaKnown RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 CNOT6LQ96LI5 555 aaKnown RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 RIOK1Q9BRS2 568 aaKnown RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.53□□□□□ -0.56
VPS18-201ENST00000220509 POLRMTO00411 1230 aaKnown RBP11.52□□□□□ -0.56
VPS18-201ENST00000220509 EZRP15311 586 aaKnown RBP11.52□□□□□ -0.56
VPS18-201ENST00000220509 RPL13P26373 211 aaKnown RBP11.52□□□□□ -0.56
VPS18-201ENST00000220509 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.56
VPS18-201ENST00000220509 KCNB1Q14721 858 aa11.52□□□□□ -0.56
VPS18-201ENST00000220509 CDC37Q16543 378 aaPredicted RBP11.52□□□□□ -0.56
VPS18-201ENST00000220509 FAM26FQ5R3K3 315 aa11.52□□□□□ -0.56
VPS18-201ENST00000220509 ZNF658Q5TYW1 1059 aaPredicted RBP11.52□□□□□ -0.56
VPS18-201ENST00000220509 CCDC80Q76M96 950 aa11.52□□□□□ -0.56
VPS18-201ENST00000220509 CCDC125Q86Z20 511 aa11.52□□□□□ -0.56
VPS18-201ENST00000220509 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.56
VPS18-201ENST00000220509 CNKSR1Q969H4 720 aa11.52□□□□□ -0.56
VPS18-201ENST00000220509 CABS1Q96KC9 395 aa11.52□□□□□ -0.56
VPS18-201ENST00000220509 CCDC17Q96LX7 622 aa11.52□□□□□ -0.56
VPS18-201ENST00000220509 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.56
VPS18-201ENST00000220509 POTEMA6NI47 508 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 BMP6P22004 513 aa11.52□□□□□ -0.57
VPS18-201ENST00000220509 TROAPQ12815 778 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms