RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 IQCB1Q15051 598 aa20.52■□□□□ 0.87
SMPD3-201ENST00000219334 EFCC1Q9HA90 598 aa20.52■□□□□ 0.87
SMPD3-201ENST00000219334 PRPSAP2O60256 369 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 KRT1P04264 644 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 MTMR1Q13613 665 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 ARL13BQ3SXY8 428 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 THEM5Q8N1Q8 247 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 GTF2A1P52655 376 aaPredicted RBP20.51■□□□□ 0.87
SMPD3-201ENST00000219334 ARHGEF1Q92888 912 aaKnown RBP20.51■□□□□ 0.87
SMPD3-201ENST00000219334 STRBPQ96SI9 672 aaKnown RBP20.51■□□□□ 0.87
SMPD3-201ENST00000219334 RAVER2Q9HCJ3 691 aaKnown RBP20.51■□□□□ 0.87
SMPD3-201ENST00000219334 CDC25AP30304 524 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 NAA25Q14CX7 972 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 ARHGEF18Q6ZSZ5 1173 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 OR6B3Q8NGW1 331 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 UHMK1Q8TAS1 419 aaKnown RBP20.51■□□□□ 0.87
SMPD3-201ENST00000219334 NSUN6Q8TEA1 469 aaKnown RBP20.51■□□□□ 0.87
SMPD3-201ENST00000219334 CALN1Q9BXU9 219 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 BHMT2Q9H2M3 363 aa20.51■□□□□ 0.87
SMPD3-201ENST00000219334 F8W8V4 182 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 STK25O00506 426 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 PLCG1P19174 1290 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 MCAMP43121 646 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 THNSL1Q8IYQ7 743 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 GDAP1Q8TB36 358 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 ARHGAP42A6NI28 874 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 TTC36A6NLP5 189 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 DCLK2Q8N568 766 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 OVOS2A0A0G2JMS6 1433 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 OVOS2A0A0J9YW53 1432 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 OVOS2Q6IE36 1432 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 ZBTB5O15062 677 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 PEX3P56589 373 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 TXNRD1Q16881 649 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 SCARA5Q6ZMJ2 495 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 SMYD4Q8IYR2 804 aaPredicted RBP20.5■□□□□ 0.87
SMPD3-201ENST00000219334 SPDYE1Q8NFV5 336 aaPredicted RBP20.5■□□□□ 0.87
SMPD3-201ENST00000219334 SH3GLB2Q9NR46 395 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 PTPN22Q9Y2R2 807 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 PHLPP2Q6ZVD8 1323 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 PRDX5P30044 214 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 MCPH1Q8NEM0 835 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 PPP1R12CQ9BZL4 782 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 TXNDC9O14530 226 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 TBC1D9BQ66K14 1250 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 KCTD6Q8NC69 237 aa20.5■□□□□ 0.87
SMPD3-201ENST00000219334 GJD4Q96KN9 370 aaPredicted RBP20.5■□□□□ 0.87
SMPD3-201ENST00000219334 BUB1BO60566 1050 aaPredicted RBP20.49■□□□□ 0.87
SMPD3-201ENST00000219334 GFPT2O94808 682 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 CPP00450 1065 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 TMTC4Q5T4D3 741 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 ATP6V0A4Q9HBG4 840 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 PCDHA6Q9UN73 950 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 INPP5FQ9Y2H2 1132 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 PCDHA8Q9Y5H6 950 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 CYP2E1P05181 493 aaPredicted RBP20.49■□□□□ 0.87
SMPD3-201ENST00000219334 ZNF853P0CG23 659 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 CCNE1P24864 410 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 ASPHQ12797 758 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 THOC5Q13769 683 aaKnown RBP20.49■□□□□ 0.87
SMPD3-201ENST00000219334 BNIP3LO60238 219 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 ZNF667Q5HYK9 610 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 MFSD14CQ5VZR4 134 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 IRAK4Q9NWZ3 460 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 PLEKHG2Q9H7P9 1386 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 PHKA2P46019 1235 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 TNFAIP2Q03169 654 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 SPP2Q13103 211 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 SEPT6Q14141 434 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 TTLL4Q14679 1199 aa20.49■□□□□ 0.87
SMPD3-201ENST00000219334 ARL6IP4Q66PJ3 421 aaKnown RBP20.49■□□□□ 0.87
SMPD3-201ENST00000219334 TWF2Q6IBS0 349 aaKnown RBP20.49■□□□□ 0.87
SMPD3-201ENST00000219334 MBD5Q9P267 1494 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 DENND3A2RUS2 1198 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 ETF1P62495 437 aaKnown RBP20.48■□□□□ 0.87
SMPD3-201ENST00000219334 ELMOD1Q8N336 334 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 RNF146Q9NTX7 359 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 TBC1D22BQ9NU19 505 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 FNDC3AQ9Y2H6 1198 aaKnown RBP20.48■□□□□ 0.87
SMPD3-201ENST00000219334 SRPRBQ9Y5M8 271 aaKnown RBP20.48■□□□□ 0.87
SMPD3-201ENST00000219334 MAPK6Q16659 721 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 SGO2Q562F6 1265 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 DARS2Q6PI48 645 aaKnown RBP20.48■□□□□ 0.87
SMPD3-201ENST00000219334 NDUFAF2Q8N183 169 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 GOLGA8IPA6NC78 632 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 GOLGA8JA6NMD2 632 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 LINC00301Q8NCQ3 95 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 NCAPD2Q15021 1401 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 POC1B-GALNT4F8VUJ3 575 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 FAM8A1Q9UBU6 413 aa20.48■□□□□ 0.87
SMPD3-201ENST00000219334 GPSM2P81274 684 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 OTUD5Q96G74 571 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 ADGBQ8N7X0 1667 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 ZBBXA8MT70 800 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 EFCAB8A8MWE9 144 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 DYNLT1P63172 113 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 RCSD1Q6JBY9 416 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 CCDC170Q8IYT3 715 aa20.47■□□□□ 0.87
SMPD3-201ENST00000219334 SPON1Q9HCB6 807 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms