RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 PCDHA12Q9UN75 941 aa19.02■□□□□ 0.64
USB1-201ENST00000219281 KLRC1P26715 233 aa19.02■□□□□ 0.63
USB1-201ENST00000219281 CCT5P48643 541 aa19.02■□□□□ 0.63
USB1-201ENST00000219281 CLK2P49760 499 aaKnown RBP19.02■□□□□ 0.63
USB1-201ENST00000219281 GNGT1P63211 74 aa19.02■□□□□ 0.63
USB1-201ENST00000219281 RAPGEF1Q13905 1077 aa19.02■□□□□ 0.63
USB1-201ENST00000219281 SEPT2Q15019 361 aa19.02■□□□□ 0.63
USB1-201ENST00000219281 NAB2Q15742 525 aa19.02■□□□□ 0.63
USB1-201ENST00000219281 IFT20Q8IY31 132 aa19.02■□□□□ 0.63
USB1-201ENST00000219281 CEP63Q96MT8 703 aa19.02■□□□□ 0.63
USB1-201ENST00000219281 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.02■□□□□ 0.63
USB1-201ENST00000219281 ALDH1B1P30837 517 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 CARSP49589 748 aaKnown RBP19.01■□□□□ 0.63
USB1-201ENST00000219281 MSL1Q68DK7 614 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
USB1-201ENST00000219281 IFT81Q8WYA0 676 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 CUL5Q93034 780 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 ZIM3Q96PE6 472 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 EPB41L5Q9HCM4 733 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 LUC7LQ9NQ29 371 aaKnown RBP19.01■□□□□ 0.63
USB1-201ENST00000219281 RNF14Q9UBS8 474 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 NFU1Q9UMS0 254 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 PACSIN2Q9UNF0 486 aaPredicted RBP19.01■□□□□ 0.63
USB1-201ENST00000219281 KIAA1024Q9UPX6 916 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 NRXN2Q9P2S2 1712 aa19.01■□□□□ 0.63
USB1-201ENST00000219281 ESYT3A0FGR9 886 aa19■□□□□ 0.63
USB1-201ENST00000219281 ZSCAN5CA6NGD5 496 aaPredicted RBP19■□□□□ 0.63
USB1-201ENST00000219281 EPB41P11171 864 aaKnown RBP19■□□□□ 0.63
USB1-201ENST00000219281 SLC16A2P36021 539 aa19■□□□□ 0.63
USB1-201ENST00000219281 RNASE9P60153 205 aaKnown RBP19■□□□□ 0.63
USB1-201ENST00000219281 GUCY2DQ02846 1103 aa19■□□□□ 0.63
USB1-201ENST00000219281 ZNF543Q08ER8 600 aa19■□□□□ 0.63
USB1-201ENST00000219281 PPP1R18Q6NYC8 613 aa19■□□□□ 0.63
USB1-201ENST00000219281 GBP6Q6ZN66 633 aa19■□□□□ 0.63
USB1-201ENST00000219281 TRIM59Q8IWR1 403 aa19■□□□□ 0.63
USB1-201ENST00000219281 PACSIN1Q9BY11 444 aa19■□□□□ 0.63
USB1-201ENST00000219281 GDF3Q9NR23 364 aa19■□□□□ 0.63
USB1-201ENST00000219281 PCDHA2Q9Y5H9 948 aa19■□□□□ 0.63
USB1-201ENST00000219281 PLIN4Q96Q06 1357 aa19■□□□□ 0.63
USB1-201ENST00000219281 A0A087X0T9 212 aa19■□□□□ 0.63
USB1-201ENST00000219281 HEXIM1O94992 359 aaKnown RBP19■□□□□ 0.63
USB1-201ENST00000219281 FAM153BP0C7A2 387 aa19■□□□□ 0.63
USB1-201ENST00000219281 FAM228BP0C875 321 aa19■□□□□ 0.63
USB1-201ENST00000219281 PDE6BP35913 854 aa19■□□□□ 0.63
USB1-201ENST00000219281 SLC18A3Q16572 532 aa19■□□□□ 0.63
USB1-201ENST00000219281 FAM153CQ494X1 144 aa19■□□□□ 0.63
USB1-201ENST00000219281 HERC4Q5GLZ8 1057 aaPredicted RBP19■□□□□ 0.63
USB1-201ENST00000219281 ZNF772Q68DY9 489 aaPredicted RBP19■□□□□ 0.63
USB1-201ENST00000219281 CCDC65Q8IXS2 484 aa19■□□□□ 0.63
USB1-201ENST00000219281 FAM133AQ8N9E0 248 aa19■□□□□ 0.63
USB1-201ENST00000219281 DDX4Q9NQI0 724 aaKnown RBP19■□□□□ 0.63
USB1-201ENST00000219281 ADAMTS1Q9UHI8 967 aa19■□□□□ 0.63
USB1-201ENST00000219281 FAM153AQ9UHL3 310 aa19■□□□□ 0.63
USB1-201ENST00000219281 GRIN2DO15399 1336 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 IGKV6D-41A0A0C4DH26 115 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 EIF3HO15372 352 aaKnown RBP eCLIP18.99■□□□□ 0.63
USB1-201ENST00000219281 GNA14O95837 355 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 PLA2G4BP0C869 781 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 KLHL30Q0D2K2 578 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 KIAA0753Q2KHM9 967 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 MASTLQ96GX5 879 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 CCDC43Q96MW1 224 aaKnown RBP18.99■□□□□ 0.63
USB1-201ENST00000219281 NT5C3AQ9H0P0 336 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 SUGT1Q9Y2Z0 365 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 TTLL1O95922 423 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 MRPL12P52815 198 aaKnown RBP18.99■□□□□ 0.63
USB1-201ENST00000219281 GABPAQ06546 454 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 NNTQ13423 1086 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 HYIQ5T013 277 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 MEI1Q5TIA1 1274 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 GPBP1Q86WP2 473 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 BCAS4Q8TDM0 211 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 SCFD1Q8WVM8 642 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 KRT12Q99456 494 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 PSTPIP2Q9H939 334 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 KCNQ5Q9NR82 932 aa18.99■□□□□ 0.63
USB1-201ENST00000219281 KDM3AQ9Y4C1 1321 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 POTEB3A0JP26 581 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 POTECB2RU33 542 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 USP17L10C9JJH3 530 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 EPS15P42566 896 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 ADAM9Q13443 819 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 ASIC2Q16515 512 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 KCTD16Q68DU8 428 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 POTEBQ6S5H4 581 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 PACS2Q86VP3 889 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 FLAD1Q8NFF5 587 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 KCTD10Q9H3F6 313 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 ZHX3Q9H4I2 956 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 EMILIN3Q9NT22 766 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 KRT14P02533 472 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 MARSP56192 900 aaKnown RBP18.98■□□□□ 0.63
USB1-201ENST00000219281 KCTD1Q719H9 257 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 SH2D3CQ8N5H7 860 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 PPM1EQ8WY54 764 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 PCDHGC5Q9Y5F6 944 aa18.98■□□□□ 0.63
USB1-201ENST00000219281 GCFC2P16383 781 aaKnown RBP18.97■□□□□ 0.63
USB1-201ENST00000219281 SCNN1DP51172 638 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 GUCY2FP51841 1108 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 PAK2Q13177 524 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms