RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 PNMA6FA0A0J9YX94 578 aa24.33■■□□□ 1.49
HTATSF1-201ENST00000218364 ERLIN2O94905 339 aa24.33■■□□□ 1.49
HTATSF1-201ENST00000218364 GCFC2P16383 781 aaKnown RBP24.33■■□□□ 1.49
HTATSF1-201ENST00000218364 KLHL30Q0D2K2 578 aa24.33■■□□□ 1.49
HTATSF1-201ENST00000218364 RAPGEF1Q13905 1077 aa24.33■■□□□ 1.49
HTATSF1-201ENST00000218364 C10orf76Q5T2E6 689 aa24.33■■□□□ 1.49
HTATSF1-201ENST00000218364 ZNF772Q68DY9 489 aaPredicted RBP24.33■■□□□ 1.49
HTATSF1-201ENST00000218364 B4GALNT4Q76KP1 1039 aa24.33■■□□□ 1.49
HTATSF1-201ENST00000218364 GAKO14976 1311 aa24.33■■□□□ 1.48
HTATSF1-201ENST00000218364 IGKV6D-41A0A0C4DH26 115 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 SLC26A4O43511 780 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 TNNC1P63316 161 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 ASIC2Q16515 512 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 SUGP1Q8IWZ8 645 aaKnown RBP24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 GPR101Q96P66 508 aaPredicted RBP24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 JMJD4Q9H9V9 463 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 ADAMTS1Q9UHI8 967 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 PCDHA12Q9UN75 941 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 IL1R1P14778 569 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 HSPA9P38646 679 aaKnown RBP24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 KCTD16Q68DU8 428 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 SPATS2Q86XZ4 545 aaKnown RBP24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 SCFD1Q8WVM8 642 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 RNPC3Q96LT9 517 aaKnown RBP24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 PAGR1Q9BTK6 254 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 PACSIN1Q9BY11 444 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 RABEP2Q9H5N1 569 aa24.32■■□□□ 1.48
HTATSF1-201ENST00000218364 UBE2SQ16763 222 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 EDRF1Q3B7T1 1238 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 PPP4R3CPQ6ZMV5 832 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 FAM133AQ8N9E0 248 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 NDUFAB1O14561 156 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 ONECUT3O60422 494 aaPredicted RBP24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 PPP1R11O60927 126 aaPredicted RBP24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 IPO4Q8TEX9 1081 aaKnown RBP24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 GNPATO15228 680 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 RAD51CO43502 376 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 LIG3P49916 1009 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 SLF2Q8IX21 1173 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 NELFCDQ8IXH7 590 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 SEPT12Q8IYM1 358 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 EMILIN3Q9NT22 766 aa24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 PACSIN2Q9UNF0 486 aaPredicted RBP24.31■■□□□ 1.48
HTATSF1-201ENST00000218364 FRMD3A2A2Y4 597 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 E9PMD0 336 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 GUCY2FP51841 1108 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 GABPAQ06546 454 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 ZNF543Q08ER8 600 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 DPY19L2P1Q6NXN4 242 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 MMS22LQ6ZRQ5 1243 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 LRRC47Q8N1G4 583 aaKnown RBP24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 CUL5Q93034 780 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 ATP6V1G3Q96LB4 118 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 NAP1L4Q99733 375 aaKnown RBP24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 TBC1D7Q9P0N9 293 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 SAMM50Q9Y512 469 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 THSD7AQ9UPZ6 1657 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 PLA2G4BP0C869 781 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 LSP1P33241 339 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 ATP1A2P50993 1020 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 ADGRF4Q8IZF3 695 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 ISCUQ9H1K1 167 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 EPN3Q9H201 632 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 GPCPD1Q9NPB8 672 aa24.3■■□□□ 1.48
HTATSF1-201ENST00000218364 HMGB1P1B2RPK0 211 aaPredicted RBP24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 DNA2P51530 1060 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 MRPL12P52815 198 aaKnown RBP24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 ADAM9Q13443 819 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 SCFD2Q8WU76 684 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 TAF4BQ92750 862 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 TAF1DQ9H5J8 278 aaPredicted RBP24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 SRRM3A6NNA2 597 aaPredicted RBP24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 BHMG1C9JSJ3 638 aaPredicted RBP24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 SSBP05455 408 aaKnown RBP eCLIP24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 CYP11B2P19099 503 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 NR1D1P20393 614 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 INPP5BP32019 993 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 GPSM2P81274 684 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 KCNH2Q12809 1159 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 HERC4Q5GLZ8 1057 aaPredicted RBP24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 IRF2BP2Q7Z5L9 587 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 KAT2BQ92831 832 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 GJA10Q969M2 543 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 PBKQ96KB5 322 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 PLCB1Q9NQ66 1216 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 SWAP70Q9UH65 585 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 KIAA1024Q9UPX6 916 aa24.29■■□□□ 1.48
HTATSF1-201ENST00000218364 C10orf71Q711Q0 1435 aa24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 USP11P51784 963 aa24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 ARID5AQ03989 594 aa24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 RPS6KA1Q15418 735 aa24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 TRADDQ15628 312 aa24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 LRIG3Q6UXM1 1119 aa24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 ARHGEF1Q92888 912 aaKnown RBP24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 KANSL2Q9H9L4 492 aa24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 ATF5Q9Y2D1 282 aaPredicted RBP24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 BZW2Q9Y6E2 419 aaKnown RBP24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 MARCH6O60337 910 aa24.28■■□□□ 1.48
HTATSF1-201ENST00000218364 GPBP1Q86WP2 473 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms