RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SPON1Q9HCB6 807 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 INTS13Q9NVM9 706 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 DNM3Q9UQ16 869 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 ZHX2Q9Y6X8 837 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 PHLPP2Q6ZVD8 1323 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 AKR1B15C9JRZ8 316 aaPredicted RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 CTNND1O60716 968 aaKnown RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 KIF4AO95239 1232 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 PLA2G4BP0C869 781 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 SREBF1P36956 1147 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 COPB1P53618 953 aaKnown RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 PMS1P54277 932 aaKnown RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 GYS2P54840 703 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 PLS1Q14651 629 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 TSR1Q2NL82 804 aaKnown RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 TCP11X2Q5H9J9 407 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 TPH2Q8IWU9 490 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 HS6ST3Q8IZP7 471 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 GIMAP8Q8ND71 665 aaPredicted RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 P2RX5Q93086 422 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 P2RX7Q99572 595 aaKnown RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 POLD4Q9HCU8 107 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 PANK4Q9NVE7 773 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 SAMM50Q9Y512 469 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 GAS7O60861 476 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 ZBED4O75132 1171 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 EPS15P42566 896 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 NR1I3Q14994 352 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 ECM1Q16610 540 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 UNC13DQ70J99 1090 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 NELFCDQ8IXH7 590 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 CCDC65Q8IXS2 484 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 C10orf67Q8IYJ2 551 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 DHTKD1Q96HY7 919 aaPredicted RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 TSG101Q99816 390 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 RPAP3Q9H6T3 665 aaPredicted RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 SYNPO2Q9UMS6 1093 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 RPS6KL1Q9Y6S9 549 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 UTRNP46939 3433 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 NPHP3-ACAD11A0A0J9YXS1 232 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 A0A1B0GTH6 734 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 EFCAB8A8MWE9 144 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 FZD9O00144 591 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 WDR46O15213 610 aaKnown RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 MSH4O15457 936 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 URI1O94763 535 aaPredicted RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 ZRANB2O95218 330 aaKnown RBP eCLIP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 MYCLP12524 364 aaPredicted RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 PAX3P23760 479 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 CCNE1P24864 410 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 DNAJC14Q6Y2X3 702 aaPredicted RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 TRPM4Q8TD43 1214 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 AS3MTQ9HBK9 375 aa9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 ADD3Q9UEY8 706 aaKnown RBP9.85□□□□□ -0.83
MTHFD1-201ENST00000216605 COL2A1P02458 1487 aaPredicted RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 ABCB11O95342 1321 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 POLR3GO15318 223 aaPredicted RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 HMGCS2P54868 508 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 RBL2Q08999 1139 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 MUM1L1Q5H9M0 696 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 CDKAL1Q5VV42 579 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 ANKRD40Q6AI12 368 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 APOBEC3FQ8IUX4 373 aaKnown RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 FAM114A1Q8IWE2 563 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 ANKRD13AQ8IZ07 590 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 ZBED3Q96IU2 234 aaPredicted RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 FAM20AQ96MK3 541 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 TEPSINQ96N21 525 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 TSPAN18Q96SJ8 248 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 ZNF577Q9BSK1 485 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 RANBP17Q9H2T7 1088 aaKnown RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 MYO1CO00159 1063 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 OPLAHO14841 1288 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 ZSCAN12O43309 604 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 MED24O75448 989 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 DDNO94850 711 aaPredicted RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 PPP1R2P41236 205 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 USP14P54578 494 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 TTLL12Q14166 644 aaPredicted RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 CTTNQ14247 550 aaKnown RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 LPAR1Q92633 364 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 CCDC97Q96F63 343 aaPredicted RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 CCDC43Q96MW1 224 aaKnown RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 NOC4LQ9BVI4 516 aaKnown RBP9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 RGL1Q9NZL6 768 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 KLHL42Q9P2K6 505 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 SIPA1L1O43166 1804 aa9.84□□□□□ -0.83
MTHFD1-201ENST00000216605 PVALEFA0A1B0GWK0 134 aa9.83□□□□□ -0.84
MTHFD1-201ENST00000216605 NFIBO00712 420 aa9.83□□□□□ -0.84
MTHFD1-201ENST00000216605 COQ9O75208 318 aa9.83□□□□□ -0.84
MTHFD1-201ENST00000216605 EIF2AK2P19525 551 aaKnown RBP9.83□□□□□ -0.84
MTHFD1-201ENST00000216605 LMNB1P20700 586 aa9.83□□□□□ -0.84
MTHFD1-201ENST00000216605 CASP14P31944 242 aa9.83□□□□□ -0.84
MTHFD1-201ENST00000216605 MAP2K2P36507 400 aa9.83□□□□□ -0.84
MTHFD1-201ENST00000216605 PRELPP51888 382 aa9.83□□□□□ -0.84
MTHFD1-201ENST00000216605 FAM26FQ5R3K3 315 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms