RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 A0A1W2PQJ5 194 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 TARSL2A2RTX5 802 aaKnown RBP13.47□□□□□ -0.25
MARK3-201ENST00000216288 SERPINB2P05120 415 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 MYBP10242 640 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 PTK2Q05397 1052 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 KCNH2Q12809 1159 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 KIAA0825Q8IV33 1275 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 FNBP4Q8N3X1 1017 aaPredicted RBP13.47□□□□□ -0.25
MARK3-201ENST00000216288 CAPS2Q9BXY5 557 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 BCCIPQ9P287 314 aaKnown RBP eCLIP13.47□□□□□ -0.25
MARK3-201ENST00000216288 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
MARK3-201ENST00000216288 ZNF543Q08ER8 600 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 ASTE1Q2TB18 679 aaPredicted RBP13.47□□□□□ -0.25
MARK3-201ENST00000216288 MAATS1Q7Z4T9 603 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 PIGOQ8TEQ8 1089 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 SPAG5Q96R06 1193 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 DBNDD1Q9H9R9 158 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
MARK3-201ENST00000216288 RGL1Q9NZL6 768 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 STK17AQ9UEE5 414 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
MARK3-201ENST00000216288 PVALEFA0A1B0GWK0 134 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 CEP104O60308 925 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 TCP1P17987 556 aaKnown RBP13.46□□□□□ -0.25
MARK3-201ENST00000216288 SEC24CP53992 1094 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 MAEAQ7L5Y9 396 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 RDH13Q8NBN7 331 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 CUL5Q93034 780 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 COL14A1Q05707 1796 aaKnown RBP13.46□□□□□ -0.25
MARK3-201ENST00000216288 RAD51CO43502 376 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 TTLL1O95922 423 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 IBSPP21815 317 aaPredicted RBP13.46□□□□□ -0.25
MARK3-201ENST00000216288 TUBB4BP68371 445 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 LRRC63Q05C16 580 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 NNTQ13423 1086 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 ARSHQ5FYA8 562 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 IQCEQ6IPM2 695 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 SFR1Q86XK3 245 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 MMGT1Q8N4V1 131 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 CASKIN2Q8WXE0 1202 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 DDX47Q9H0S4 455 aaKnown RBP13.46□□□□□ -0.25
MARK3-201ENST00000216288 VIPAS39Q9H9C1 493 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 MAGEF1Q9HAY2 307 aa13.46□□□□□ -0.25
MARK3-201ENST00000216288 PNMA6FA0A0J9YX94 578 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 G3V3G9 751 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 HSF2BPO75031 334 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 PPFIA4O75335 1185 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 CYP11B2P19099 503 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 MCM3P25205 808 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 CFAP221Q4G0U5 840 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 FIGNQ5HY92 759 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 ZNF571Q7Z3V5 609 aaPredicted RBP13.46□□□□□ -0.26
MARK3-201ENST00000216288 RPGRIP1Q96KN7 1286 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 SH2D3AQ9BRG2 576 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 ROBO3Q96MS0 1386 aa13.46□□□□□ -0.26
MARK3-201ENST00000216288 GRID2IPA4D2P6 1211 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 TUBBP07437 444 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 ITGA4P13612 1032 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 ABCB4P21439 1286 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 HNRNPH3P31942 346 aaKnown RBP13.45□□□□□ -0.26
MARK3-201ENST00000216288 SHMT1P34896 483 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 SEPT11Q9NVA2 429 aaKnown RBP13.45□□□□□ -0.26
MARK3-201ENST00000216288 ATP6V0A2Q9Y487 856 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 ZNF233A6NK53 670 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 ASIC2Q16515 512 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 TMEM119Q4V9L6 283 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 ZCWPW2Q504Y3 356 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 CATSPER3Q86XQ3 398 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 DHX37Q8IY37 1157 aaKnown RBP13.45□□□□□ -0.26
MARK3-201ENST00000216288 ELMO3Q96BJ8 720 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 LRRC4CQ9HCJ2 640 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 RIC8AQ9NPQ8 531 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 PKD2L1Q9P0L9 805 aa13.45□□□□□ -0.26
MARK3-201ENST00000216288 MRPL12P52815 198 aaKnown RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 PDE4CQ08493 712 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 PRPF4BQ13523 1007 aaKnown RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 CFAP58Q5T655 872 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 RNPC3Q96LT9 517 aaKnown RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 CELF4Q9BZC1 486 aaKnown RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 HDAC9Q9UKV0 1011 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 ZBTB5O15062 677 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 LRRN2O75325 713 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 FGFR1OPO95684 399 aaKnown RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 SERPING1P05155 500 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 FLT3P36888 993 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 CDK17Q00537 523 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 CTTNQ14247 550 aaKnown RBP13.44□□□□□ -0.26
MARK3-201ENST00000216288 COG2Q14746 738 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 SEPT2Q15019 361 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 FBXW10Q5XX13 1052 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 CCDC65Q8IXS2 484 aa13.44□□□□□ -0.26
MARK3-201ENST00000216288 REEP2Q9BRK0 252 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms